RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 CYFIP2Q96F07 1278 aa22.23■■□□□ 1.15
CD47-202ENST00000361309 KCTD10Q9H3F6 313 aa22.23■■□□□ 1.15
CD47-202ENST00000361309 SUSD2Q9UGT4 822 aa22.23■■□□□ 1.15
CD47-202ENST00000361309 SERTAD1Q9UHV2 236 aa22.23■■□□□ 1.15
CD47-202ENST00000361309 PCDHA5Q9Y5H7 936 aa22.23■■□□□ 1.15
CD47-202ENST00000361309 PTPRBP23467 1997 aa22.23■■□□□ 1.15
CD47-202ENST00000361309 KNL1Q8NG31 2342 aa22.22■■□□□ 1.15
CD47-202ENST00000361309 GJB3O75712 270 aa22.22■■□□□ 1.15
CD47-202ENST00000361309 STC2O76061 302 aa22.22■■□□□ 1.15
CD47-202ENST00000361309 NR3C1P04150 777 aa22.22■■□□□ 1.15
CD47-202ENST00000361309 GNSP15586 552 aa22.22■■□□□ 1.15
CD47-202ENST00000361309 TRIM21P19474 475 aaKnown RBP22.22■■□□□ 1.15
CD47-202ENST00000361309 ME1P48163 572 aa22.22■■□□□ 1.15
CD47-202ENST00000361309 RING1Q06587 406 aa22.22■■□□□ 1.15
CD47-202ENST00000361309 SLC14A1Q13336 389 aa22.22■■□□□ 1.15
CD47-202ENST00000361309 C1orf220Q5T0J3 134 aa22.22■■□□□ 1.15
CD47-202ENST00000361309 CEP135Q66GS9 1140 aa22.22■■□□□ 1.15
CD47-202ENST00000361309 CEP57L1Q8IYX8 460 aa22.22■■□□□ 1.15
CD47-202ENST00000361309 EXOC1Q9NV70 894 aa22.22■■□□□ 1.15
CD47-202ENST00000361309 NAGPAQ9UK23 515 aa22.22■■□□□ 1.15
CD47-202ENST00000361309 FBXO10Q9UK96 956 aa22.22■■□□□ 1.15
CD47-202ENST00000361309 STON1Q9Y6Q2 735 aa22.22■■□□□ 1.15
CD47-202ENST00000361309 ADAMTS20P59510 1910 aa22.21■■□□□ 1.15
CD47-202ENST00000361309 IKBKBO14920 756 aa22.21■■□□□ 1.15
CD47-202ENST00000361309 CD6P30203 668 aa22.21■■□□□ 1.15
CD47-202ENST00000361309 INCA1Q0VD86 236 aa22.21■■□□□ 1.15
CD47-202ENST00000361309 TRIP6Q15654 476 aaKnown RBP22.21■■□□□ 1.15
CD47-202ENST00000361309 FUT11Q495W5 492 aa22.21■■□□□ 1.15
CD47-202ENST00000361309 KMT5BQ4FZB7 885 aa22.21■■□□□ 1.15
CD47-202ENST00000361309 WDR45BQ5MNZ6 344 aa22.21■■□□□ 1.15
CD47-202ENST00000361309 LRSAM1Q6UWE0 723 aa22.21■■□□□ 1.15
CD47-202ENST00000361309 SCD5Q86SK9 330 aa22.21■■□□□ 1.15
CD47-202ENST00000361309 BACH2Q9BYV9 841 aa22.21■■□□□ 1.15
CD47-202ENST00000361309 PNPLA8Q9NP80 782 aa22.21■■□□□ 1.15
CD47-202ENST00000361309 LHX6Q9UPM6 363 aa22.21■■□□□ 1.15
CD47-202ENST00000361309 PCDHB9Q9Y5E1 797 aa22.21■■□□□ 1.15
CD47-202ENST00000361309 FASNP49327 2511 aaKnown RBP22.21■■□□□ 1.15
CD47-202ENST00000361309 PDXKO00764 312 aa22.2■■□□□ 1.14
CD47-202ENST00000361309 KIF11P52732 1056 aa22.2■■□□□ 1.14
CD47-202ENST00000361309 GRIK2Q13002 908 aa22.2■■□□□ 1.14
CD47-202ENST00000361309 STARD3Q14849 445 aa22.2■■□□□ 1.14
CD47-202ENST00000361309 NUMA1Q14980 2115 aa22.2■■□□□ 1.14
CD47-202ENST00000361309 TOE1Q96GM8 510 aaKnown RBP22.2■■□□□ 1.14
CD47-202ENST00000361309 PAGE5Q96GU1 130 aa22.2■■□□□ 1.14
CD47-202ENST00000361309 NT5C1AQ9BXI3 368 aa22.2■■□□□ 1.14
CD47-202ENST00000361309 PRDM16Q9HAZ2 1276 aa22.2■■□□□ 1.14
CD47-202ENST00000361309 APOBEC3GQ9HC16 384 aaKnown RBP22.2■■□□□ 1.14
CD47-202ENST00000361309 WSB2Q9NYS7 404 aaPredicted RBP22.2■■□□□ 1.14
CD47-202ENST00000361309 FRMD4BQ9Y2L6 1034 aa22.2■■□□□ 1.14
CD47-202ENST00000361309 SLC27A6Q9Y2P4 619 aa22.2■■□□□ 1.14
CD47-202ENST00000361309 LAMA5O15230 3695 aa22.2■■□□□ 1.14
CD47-202ENST00000361309 TAF4O00268 1085 aa22.19■■□□□ 1.14
CD47-202ENST00000361309 KIF20AO95235 890 aa22.19■■□□□ 1.14
CD47-202ENST00000361309 PENKP01210 267 aaPredicted RBP22.19■■□□□ 1.14
CD47-202ENST00000361309 KLKB1P03952 638 aa22.19■■□□□ 1.14
CD47-202ENST00000361309 CENPBP07199 599 aaPredicted RBP22.19■■□□□ 1.14
CD47-202ENST00000361309 SLFN14P0C7P3 912 aa22.19■■□□□ 1.14
CD47-202ENST00000361309 PSEN1P49768 467 aa22.19■■□□□ 1.14
CD47-202ENST00000361309 MFAP3P55082 362 aa22.19■■□□□ 1.14
CD47-202ENST00000361309 GEN1Q17RS7 908 aa22.19■■□□□ 1.14
CD47-202ENST00000361309 FYB2Q5VWT5 728 aa22.19■■□□□ 1.14
CD47-202ENST00000361309 TADA2BQ86TJ2 420 aa22.19■■□□□ 1.14
CD47-202ENST00000361309 METTL3Q86U44 580 aaKnown RBP22.19■■□□□ 1.14
CD47-202ENST00000361309 NAXDQ8IW45 347 aa22.19■■□□□ 1.14
CD47-202ENST00000361309 SPRYD3Q8NCJ5 442 aa22.19■■□□□ 1.14
CD47-202ENST00000361309 GPR174Q9BXC1 333 aa22.19■■□□□ 1.14
CD47-202ENST00000361309 MKRN2Q9H000 416 aaKnown RBP22.19■■□□□ 1.14
CD47-202ENST00000361309 CYP3A43Q9HB55 503 aa22.19■■□□□ 1.14
CD47-202ENST00000361309 USP36Q9P275 1121 aaKnown RBP22.19■■□□□ 1.14
CD47-202ENST00000361309 THAP10Q9P2Z0 257 aaPredicted RBP22.19■■□□□ 1.14
CD47-202ENST00000361309 ZNF510Q9Y2H8 683 aa22.19■■□□□ 1.14
CD47-202ENST00000361309 CABIN1Q9Y6J0 2220 aa22.18■■□□□ 1.14
CD47-202ENST00000361309 MEI4A8MW99 385 aa22.18■■□□□ 1.14
CD47-202ENST00000361309 ACTN4O43707 911 aaKnown RBP22.18■■□□□ 1.14
CD47-202ENST00000361309 CAPNS1P04632 268 aa22.18■■□□□ 1.14
CD47-202ENST00000361309 RALAP11233 206 aa22.18■■□□□ 1.14
CD47-202ENST00000361309 CD58P19256 250 aa22.18■■□□□ 1.14
CD47-202ENST00000361309 IL12RB1P42701 662 aa22.18■■□□□ 1.14
CD47-202ENST00000361309 VAMP7P51809 220 aa22.18■■□□□ 1.14
CD47-202ENST00000361309 CCDC186Q7Z3E2 898 aa22.18■■□□□ 1.14
CD47-202ENST00000361309 ZNF276Q8N554 614 aa22.18■■□□□ 1.14
CD47-202ENST00000361309 DNASE2BQ8WZ79 361 aa22.18■■□□□ 1.14
CD47-202ENST00000361309 IMPG2Q9BZV3 1241 aa22.18■■□□□ 1.14
CD47-202ENST00000361309 ITM2CQ9NQX7 267 aa22.18■■□□□ 1.14
CD47-202ENST00000361309 RASAL2Q9UJF2 1139 aa22.18■■□□□ 1.14
CD47-202ENST00000361309 TMEM131Q92545 1883 aa22.17■■□□□ 1.14
CD47-202ENST00000361309 ACACAQ13085 2346 aa22.17■■□□□ 1.14
CD47-202ENST00000361309 A0A1B0GTW7 788 aa22.17■■□□□ 1.14
CD47-202ENST00000361309 KCNJ18B7U540 433 aa22.17■■□□□ 1.14
CD47-202ENST00000361309 CILPO75339 1184 aa22.17■■□□□ 1.14
CD47-202ENST00000361309 HMBSP08397 361 aa22.17■■□□□ 1.14
CD47-202ENST00000361309 FTH1P19P0C7X4 201 aa22.17■■□□□ 1.14
CD47-202ENST00000361309 ZSCAN22P10073 491 aaPredicted RBP22.17■■□□□ 1.14
CD47-202ENST00000361309 NCAM1P13591 858 aa22.17■■□□□ 1.14
CD47-202ENST00000361309 PDIA4P13667 645 aaKnown RBP22.17■■□□□ 1.14
CD47-202ENST00000361309 CHKAP35790 457 aa22.17■■□□□ 1.14
CD47-202ENST00000361309 PPP1R26Q5T8A7 1209 aaPredicted RBP22.17■■□□□ 1.14
CD47-202ENST00000361309 ZCCHC9Q8N567 271 aaKnown RBP22.17■■□□□ 1.14
CD47-202ENST00000361309 PNPLA1Q8N8W4 532 aa22.17■■□□□ 1.14
CD47-202ENST00000361309 TAS1R2Q8TE23 839 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms