RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 CENPTQ96BT3 561 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 IL17RBQ9NRM6 502 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 MCM8Q9UJA3 840 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 FER1L4A9Z1Z3 1794 aa20.87■□□□□ 0.93
CDC42BPB-201ENST00000361246 CCR4P51679 360 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 ERMARDQ5T6L9 678 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 PCYOX1LQ8NBM8 494 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 OSGEPQ9NPF4 335 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 GRID1Q9ULK0 1009 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 FIBCD1Q8N539 461 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 SEMA6BQ9H3T3 888 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 C10orf88Q9H8K7 445 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 ZNF682O95780 498 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 TMEM253P0C7T8 217 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 GEMIN4P57678 1058 aaKnown RBP20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 RNF168Q8IYW5 571 aaPredicted RBP20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 EME1Q96AY2 570 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 PEX10O60683 326 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 PTPRAP18433 802 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 CD52P31358 61 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 NFIL3Q16649 462 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 CENPLQ8N0S6 344 aaPredicted RBP20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 YIPF3Q9GZM5 350 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 FBXO44Q9H4M3 255 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 LZTS1Q9Y250 596 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 THOP1P52888 689 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 SNRPFP62306 86 aaKnown RBP20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 PPATQ06203 517 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 KRT84Q9NSB2 600 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 GPRC5DQ9NZD1 345 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 TREML2Q5T2D2 321 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 RGMBQ6NW40 437 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 E2F7Q96AV8 911 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 KIAA1683Q9H0B3 1180 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 TKTL2Q9H0I9 626 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 VTA1Q9NP79 307 aa20.86■□□□□ 0.93
CDC42BPB-201ENST00000361246 CCL16O15467 120 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 INSCQ1MX18 579 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 BOLA3Q53S33 107 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 NACC2Q96BF6 587 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 TMEM120BA0PK00 339 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 BUD23O43709 281 aaKnown RBP20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 ARHGEF19Q8IW93 802 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 COL26A1Q96A83 441 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 ZNF558Q96NG5 402 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 SLC29A2Q14542 456 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 GRIK5Q16478 980 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 WSCD1Q658N2 575 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 C16orf89Q6UX73 402 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 MTSS1O43312 755 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 MTA2O94776 668 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 FMO4P31512 558 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 SPATA20Q8TB22 786 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 IL17RAQ96F46 866 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 CNDP1Q96KN2 507 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 GAS2L1Q99501 681 aaPredicted RBP20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 CXCL14O95715 111 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 EIF2B5Q13144 721 aaKnown RBP20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 DACT2Q5SW24 774 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 MARC1Q5VT66 337 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 ZNF720Q7Z2F6 126 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 TINF2Q9BSI4 451 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 CRYL1Q9Y2S2 319 aa20.85■□□□□ 0.93
CDC42BPB-201ENST00000361246 HNRNPH2P55795 449 aaKnown RBP20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 TRIM32Q13049 653 aa20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 RAP1GAP2Q684P5 730 aa20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 COL5A2P05997 1499 aaPredicted RBP20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 IL1BP01584 269 aa20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 GSSP48637 474 aa20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 SPOCD1Q6ZMY3 1216 aa20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 FAM83AQ86UY5 434 aa20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 CNBD2Q96M20 576 aa20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 GPAMQ9HCL2 828 aa20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 LRRIQ3A6PVS8 624 aaPredicted RBP20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 TBL1XO60907 577 aa20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 SMNDC1O75940 238 aaKnown RBP eCLIP20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 WASP42768 502 aa20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 GID8Q9NWU2 228 aa20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 BARX2Q9UMQ3 279 aaPredicted RBP20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 CASZ1Q86V15 1759 aa20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 CHADLQ6NUI6 762 aa20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 EPS8L3Q8TE67 593 aaKnown RBP20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 OLFML3Q9NRN5 406 aa20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 LINC00854A0A1B0GVQ3 168 aa20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 RAB27AP51159 221 aa20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 YWHAZP63104 245 aaKnown RBP20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 MAP3K10Q02779 954 aa20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 HLA-DQA1Q5Y7H0 255 aa20.84■□□□□ 0.93
CDC42BPB-201ENST00000361246 TRAV19A0A0A6YYK7 116 aa20.83■□□□□ 0.93
CDC42BPB-201ENST00000361246 SLC2A4P14672 509 aa20.83■□□□□ 0.93
CDC42BPB-201ENST00000361246 BCL2L1Q07817 233 aa20.83■□□□□ 0.93
CDC42BPB-201ENST00000361246 GATAD2AQ86YP4 633 aa20.83■□□□□ 0.93
CDC42BPB-201ENST00000361246 EXD1Q8NHP7 514 aa20.83■□□□□ 0.93
CDC42BPB-201ENST00000361246 SKA1Q96BD8 255 aa20.83■□□□□ 0.93
CDC42BPB-201ENST00000361246 TM6SF2Q9BZW4 377 aa20.83■□□□□ 0.93
CDC42BPB-201ENST00000361246 RANBP17Q9H2T7 1088 aaKnown RBP20.83■□□□□ 0.93
CDC42BPB-201ENST00000361246 DIP2CQ9Y2E4 1556 aa20.83■□□□□ 0.93
CDC42BPB-201ENST00000361246 MEI4A8MW99 385 aa20.83■□□□□ 0.93
CDC42BPB-201ENST00000361246 FAM107AO95990 144 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms