RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 SYNPOQ8N3V7 929 aa8.04□□□□□ -1.12
CCL28-201ENST00000361115 ZBTB44Q8NCP5 570 aa8.04□□□□□ -1.12
CCL28-201ENST00000361115 NIFKQ9BYG3 293 aaKnown RBP8.04□□□□□ -1.12
CCL28-201ENST00000361115 ZHX3Q9H4I2 956 aa8.04□□□□□ -1.12
CCL28-201ENST00000361115 PSTPIP2Q9H939 334 aa8.04□□□□□ -1.12
CCL28-201ENST00000361115 VAT1LQ9HCJ6 419 aa8.04□□□□□ -1.12
CCL28-201ENST00000361115 RNF19AQ9NV58 838 aa8.04□□□□□ -1.12
CCL28-201ENST00000361115 NINJ2Q9NZG7 142 aa8.04□□□□□ -1.12
CCL28-201ENST00000361115 GCNT4Q9P109 453 aa8.04□□□□□ -1.12
CCL28-201ENST00000361115 EXOC3O60645 756 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 PPP1R11O60927 126 aaPredicted RBP8.03□□□□□ -1.12
CCL28-201ENST00000361115 DCTN3O75935 186 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 PENKP01210 267 aaPredicted RBP8.03□□□□□ -1.12
CCL28-201ENST00000361115 FGFR1P11362 822 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 HOXD13P35453 343 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 RASSF2P50749 326 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 ACTR2P61160 394 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 CDR2Q01850 454 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 VAC14Q08AM6 782 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 LSAMPQ13449 338 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 TMEM266Q2M3C6 531 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 CEP55Q53EZ4 464 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 RHBDF2Q6PJF5 856 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 GLB1LQ6UWU2 654 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 MTDHQ86UE4 582 aaKnown RBP8.03□□□□□ -1.12
CCL28-201ENST00000361115 AGAP3Q96P47 875 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 ADAM2Q99965 735 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 SPOCK3Q9BQ16 436 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 SYT11Q9BT88 431 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 POMKQ9H5K3 350 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 C6orf50Q9HD87 102 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 SEPT11Q9NVA2 429 aaKnown RBP8.03□□□□□ -1.12
CCL28-201ENST00000361115 ETNK2Q9NVF9 386 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 LGALS13Q9UHV8 139 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 ZFP69BQ9UJL9 534 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 ST3GAL5Q9UNP4 418 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 RPL26L1Q9UNX3 145 aaKnown RBP8.03□□□□□ -1.12
CCL28-201ENST00000361115 EDF1O60869 148 aaKnown RBP8.03□□□□□ -1.12
CCL28-201ENST00000361115 LILRB3O75022 631 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 ATP6V1G1O75348 118 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 GPR32O75388 356 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 ECI2O75521 394 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 SOD2P04179 222 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 BPIFB4P59827 614 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 CALCOCO2Q13137 446 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 TMED2Q15363 201 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 PPP1R21Q6ZMI0 780 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 LCA5Q86VQ0 697 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 PMM1Q92871 262 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 IGSF21Q96ID5 467 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 UCN2Q96RP3 112 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 ZSWIM1Q9BR11 485 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 NFKBIZQ9BYH8 718 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 LRRC27Q9C0I9 530 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 VCX3BQ9H321 246 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 RETREG1Q9H6L5 497 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 AGO3Q9H9G7 860 aaKnown RBP8.03□□□□□ -1.12
CCL28-201ENST00000361115 VCX3AQ9NNX9 186 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 ARL8BQ9NVJ2 186 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 LNPEPQ9UIQ6 1025 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 FBXL21Q9UKT6 434 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 hCG_2014768A0A024R1R8 64 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 FAM47DPA6NHR8 397 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 FGF19O95750 216 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 SOX5P35711 763 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 STAT1P42224 750 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 MCCD1P59942 119 aaPredicted RBP8.03□□□□□ -1.12
CCL28-201ENST00000361115 TRIP13Q15645 432 aaPredicted RBP8.03□□□□□ -1.12
CCL28-201ENST00000361115 CYP1B1Q16678 543 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 EDRF1Q3B7T1 1238 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 LIN52Q52LA3 116 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 RFX8Q6ZV50 586 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 HS2ST1Q7LGA3 356 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 NLRP9Q7RTR0 991 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 TMC7Q7Z402 723 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 SPRED2Q7Z698 418 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 GPBP1Q86WP2 473 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 C1orf210Q8IVY1 113 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 CCDC65Q8IXS2 484 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 KIAA0319LQ8IZA0 1049 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 REXO1Q8N1G1 1221 aaKnown RBP8.03□□□□□ -1.12
CCL28-201ENST00000361115 IL31RAQ8NI17 732 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 DENND1AQ8TEH3 1009 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 PRR11Q96HE9 360 aaPredicted RBP8.03□□□□□ -1.12
CCL28-201ENST00000361115 PIGSQ96S52 555 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 HAPLN3Q96S86 360 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 ZNF184Q99676 751 aaPredicted RBP8.03□□□□□ -1.12
CCL28-201ENST00000361115 BCAS3Q9H6U6 928 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 TYW1Q9NV66 732 aaKnown RBP8.03□□□□□ -1.12
CCL28-201ENST00000361115 RHBDL2Q9NX52 303 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 HSFX1Q9UBD0 423 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 RABL2AQ9UBK7 228 aaPredicted RBP8.03□□□□□ -1.12
CCL28-201ENST00000361115 HCFC2Q9Y5Z7 792 aa8.03□□□□□ -1.12
CCL28-201ENST00000361115 MYH11P35749 1972 aa8.02□□□□□ -1.13
CCL28-201ENST00000361115 RASA4BC9J798 803 aa8.02□□□□□ -1.13
CCL28-201ENST00000361115 GSC2O15499 205 aa8.02□□□□□ -1.13
CCL28-201ENST00000361115 MAP3K7O43318 606 aa8.02□□□□□ -1.13
CCL28-201ENST00000361115 RASA4O43374 803 aa8.02□□□□□ -1.13
CCL28-201ENST00000361115 HNRNPRO43390 633 aaKnown RBP8.02□□□□□ -1.13
CCL28-201ENST00000361115 THAP12O43422 761 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms