RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 CNTN3Q9P232 1028 aa12.88□□□□□ -0.35
UBA3-202ENST00000361055 PCSK1NQ9UHG2 260 aa12.88□□□□□ -0.35
UBA3-202ENST00000361055 USP18Q9UMW8 372 aa12.88□□□□□ -0.35
UBA3-202ENST00000361055 NOD1Q9Y239 953 aa12.88□□□□□ -0.35
UBA3-202ENST00000361055 NUMBLQ9Y6R0 609 aa12.88□□□□□ -0.35
UBA3-202ENST00000361055 TCRBV9S1A1TA0A576 114 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 M0QZ92 97 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 ACKR2O00590 384 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 TRDMT1O14717 391 aaKnown RBP12.87□□□□□ -0.35
UBA3-202ENST00000361055 INHBAP08476 426 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 DLDP09622 509 aaKnown RBP12.87□□□□□ -0.35
UBA3-202ENST00000361055 ABL2P42684 1182 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 PTDSS1P48651 473 aaKnown RBP12.87□□□□□ -0.35
UBA3-202ENST00000361055 BASP1P80723 227 aaKnown RBP12.87□□□□□ -0.35
UBA3-202ENST00000361055 FAAP100Q0VG06 881 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 TFDP2Q14188 446 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 KCNJ11Q14654 390 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 CAPRIN2Q6IMN6 1127 aaKnown RBP12.87□□□□□ -0.35
UBA3-202ENST00000361055 DARS2Q6PI48 645 aaKnown RBP12.87□□□□□ -0.35
UBA3-202ENST00000361055 TTC8Q8TAM2 541 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 APBB2Q92870 758 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 SKA1Q96BD8 255 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 KLF6Q99612 283 aaPredicted RBP12.87□□□□□ -0.35
UBA3-202ENST00000361055 MIPEPQ99797 713 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 MMADHCQ9H3L0 296 aaPredicted RBP12.87□□□□□ -0.35
UBA3-202ENST00000361055 TRMT13Q9NUP7 481 aaKnown RBP12.87□□□□□ -0.35
UBA3-202ENST00000361055 NXF1Q9UBU9 619 aaKnown RBP12.87□□□□□ -0.35
UBA3-202ENST00000361055 TJP2Q9UDY2 1190 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 CHMP2BQ9UQN3 213 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 GINS2Q9Y248 185 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 A0A0G2JND7 137 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 CFAP69A5D8W1 941 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 ENTPD5O75356 428 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 PIAS1O75925 651 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 ERBB2P04626 1255 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 IQCF3P0C7M6 154 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 CDK7P50613 346 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 ROR1Q01973 937 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 ZBTB16Q05516 673 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 NOMO1Q15155 1222 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 PCBP1Q15365 356 aaKnown RBP eCLIP12.87□□□□□ -0.35
UBA3-202ENST00000361055 KBTBD12Q3ZCT8 623 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 ZNF667Q5HYK9 610 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 LGSNQ5TDP6 509 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 MPZL3Q6UWV2 235 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 SCARA5Q6ZMJ2 495 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 SLC26A11Q86WA9 606 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 TRIM42Q8IWZ5 723 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 EMC1Q8N766 993 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.87□□□□□ -0.35
UBA3-202ENST00000361055 OSMRQ99650 979 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 C12orf65Q9H3J6 166 aaKnown RBP12.87□□□□□ -0.35
UBA3-202ENST00000361055 SYNCQ9H7C4 482 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 METTL5Q9NRN9 209 aaKnown RBP12.87□□□□□ -0.35
UBA3-202ENST00000361055 STOML1Q9UBI4 398 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 ZNF180Q9UJW8 692 aa12.87□□□□□ -0.35
UBA3-202ENST00000361055 GYG2O15488 501 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 IL18RAPO95256 599 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 PYGBP11216 843 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 ACADSP16219 412 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 MNX1P50219 401 aaPredicted RBP12.86□□□□□ -0.35
UBA3-202ENST00000361055 ZNF143P52747 638 aaPredicted RBP12.86□□□□□ -0.35
UBA3-202ENST00000361055 CRYBB1P53674 252 aaPredicted RBP12.86□□□□□ -0.35
UBA3-202ENST00000361055 MRPS6P82932 125 aaKnown RBP12.86□□□□□ -0.35
UBA3-202ENST00000361055 TSNAXIP1Q2TAA8 658 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 KHDC1Q4VXA5 237 aaKnown RBP12.86□□□□□ -0.35
UBA3-202ENST00000361055 TTC39BQ5VTQ0 682 aaPredicted RBP12.86□□□□□ -0.35
UBA3-202ENST00000361055 LMNTD2Q8IXW0 634 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 MICAL1Q8TDZ2 1067 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 HSPH1Q92598 858 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 WNT8BQ93098 351 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 SPDL1Q96EA4 605 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 TMEM120AQ9BXJ8 343 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 SENP6Q9GZR1 1112 aaPredicted RBP12.86□□□□□ -0.35
UBA3-202ENST00000361055 CDHR5Q9HBB8 845 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 USP29Q9HBJ7 922 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 PAK5Q9P286 719 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 CSDE1O75534 798 aaKnown RBP12.86□□□□□ -0.35
UBA3-202ENST00000361055 NEBLO76041 1014 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 NEFHP12036 1026 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 DARSP14868 501 aaKnown RBP12.86□□□□□ -0.35
UBA3-202ENST00000361055 SERPINB4P48594 390 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 TAF5Q15542 800 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 AMHR2Q16671 573 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 APLFQ8IW19 511 aaPredicted RBP12.86□□□□□ -0.35
UBA3-202ENST00000361055 TAB3Q8N5C8 712 aaPredicted RBP12.86□□□□□ -0.35
UBA3-202ENST00000361055 TMEM176AQ96HP8 235 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 FAM111AQ96PZ2 611 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 CNPY3Q9BT09 278 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 TMEM106CQ9BVX2 250 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 CALN1Q9BXU9 219 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 MCOLN1Q9GZU1 580 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 ALG13Q9NP73 1137 aaKnown RBP12.86□□□□□ -0.35
UBA3-202ENST00000361055 ZFATQ9P243 1243 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 TRPV2Q9Y5S1 764 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 CDY2AQ9Y6F7 541 aa12.86□□□□□ -0.35
UBA3-202ENST00000361055 SNRPAP09012 282 aaKnown RBP12.85□□□□□ -0.35
UBA3-202ENST00000361055 GSTA2P09210 222 aa12.85□□□□□ -0.35
UBA3-202ENST00000361055 ESRRAP11474 423 aaPredicted RBP12.85□□□□□ -0.35
UBA3-202ENST00000361055 SERPINB3P29508 390 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms