RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 HSFX1Q9UBD0 423 aa24.11■■□□□ 1.45
SDF4-202ENST00000360001 PLXNA4Q9HCM2 1894 aa24.1■■□□□ 1.45
SDF4-202ENST00000360001 ESYT3A0FGR9 886 aa24.1■■□□□ 1.45
SDF4-202ENST00000360001 FAM187AA6NFU0 413 aa24.1■■□□□ 1.45
SDF4-202ENST00000360001 EIF4EBP2Q13542 120 aaPredicted RBP24.1■■□□□ 1.45
SDF4-202ENST00000360001 PPP6R3Q5H9R7 873 aaPredicted RBP24.1■■□□□ 1.45
SDF4-202ENST00000360001 CCNI2Q6ZMN8 369 aaPredicted RBP24.1■■□□□ 1.45
SDF4-202ENST00000360001 JAMLQ86YT9 394 aa24.1■■□□□ 1.45
SDF4-202ENST00000360001 CCDC105Q8IYK2 499 aa24.1■■□□□ 1.45
SDF4-202ENST00000360001 GIPC2Q8TF65 315 aa24.1■■□□□ 1.45
SDF4-202ENST00000360001 DPF3Q92784 378 aa24.1■■□□□ 1.45
SDF4-202ENST00000360001 FAF2Q96CS3 445 aa24.1■■□□□ 1.45
SDF4-202ENST00000360001 CEP295NLQ96MC4 621 aa24.1■■□□□ 1.45
SDF4-202ENST00000360001 RNF157Q96PX1 679 aa24.1■■□□□ 1.45
SDF4-202ENST00000360001 ZNF670Q9BS34 389 aa24.1■■□□□ 1.45
SDF4-202ENST00000360001 TRIM51Q9BSJ1 452 aa24.1■■□□□ 1.45
SDF4-202ENST00000360001 MTIF3Q9H2K0 278 aaKnown RBP24.1■■□□□ 1.45
SDF4-202ENST00000360001 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.1■■□□□ 1.451e-7■■■■□ 19.9
SDF4-202ENST00000360001 FBXW11Q9UKB1 542 aa24.1■■□□□ 1.45
SDF4-202ENST00000360001 ZNF487B1APH4 448 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 MYBL2P10244 700 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 CTSAP10619 480 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 IFT20Q8IY31 132 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 PYROXD2Q8N2H3 581 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 ARHGAP18Q8N392 663 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 SLCO2A1Q92959 643 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 FBXO32Q969P5 355 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 NTAN1Q96AB6 310 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.09■■□□□ 1.45
SDF4-202ENST00000360001 FNIP2Q9P278 1114 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 SLC38A8A6NNN8 435 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 LIASO43766 372 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 TNFRSF8P28908 595 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 ADRA1BP35368 520 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 CXCR3P49682 368 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 TRADDQ15628 312 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 ANKRD20A8PQ5CZ79 823 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 CASKIN2Q8WXE0 1202 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 HAUS1Q96CS2 278 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 SMOC2Q9H3U7 446 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 RXFP1Q9HBX9 757 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 ANLNQ9NQW6 1124 aa24.09■■□□□ 1.45
SDF4-202ENST00000360001 I6L893 689 aaPredicted RBP24.08■■□□□ 1.45
SDF4-202ENST00000360001 AIF1P55008 147 aa24.08■■□□□ 1.45
SDF4-202ENST00000360001 SCAPQ12770 1279 aa24.08■■□□□ 1.45
SDF4-202ENST00000360001 TAF10Q12962 218 aa24.08■■□□□ 1.45
SDF4-202ENST00000360001 PQLC3Q8N755 202 aa24.08■■□□□ 1.45
SDF4-202ENST00000360001 PCDH19Q8TAB3 1148 aa24.08■■□□□ 1.45
SDF4-202ENST00000360001 HNRNPLLQ8WVV9 542 aaKnown RBP24.08■■□□□ 1.45
SDF4-202ENST00000360001 SEC14L1Q92503 715 aa24.08■■□□□ 1.45
SDF4-202ENST00000360001 CASP10Q92851 521 aa24.08■■□□□ 1.45
SDF4-202ENST00000360001 TTLL2Q9BWV7 592 aa24.08■■□□□ 1.45
SDF4-202ENST00000360001 MAK16Q9BXY0 300 aaKnown RBP24.08■■□□□ 1.45
SDF4-202ENST00000360001 SAE1Q9UBE0 346 aaPredicted RBP24.08■■□□□ 1.45
SDF4-202ENST00000360001 TEX28O15482 410 aa24.07■■□□□ 1.44
SDF4-202ENST00000360001 TFDP2Q14188 446 aa24.07■■□□□ 1.44
SDF4-202ENST00000360001 DRICH1Q6PGQ1 229 aaPredicted RBP24.07■■□□□ 1.44
SDF4-202ENST00000360001 CYP4F11Q9HBI6 524 aa24.07■■□□□ 1.44
SDF4-202ENST00000360001 DNPEPQ9ULA0 475 aa24.07■■□□□ 1.44
SDF4-202ENST00000360001 IRAK2O43187 625 aa24.07■■□□□ 1.44
SDF4-202ENST00000360001 ECEL1O95672 775 aa24.07■■□□□ 1.44
SDF4-202ENST00000360001 BMPR1AP36894 532 aa24.07■■□□□ 1.44
SDF4-202ENST00000360001 CARSP49589 748 aaKnown RBP24.07■■□□□ 1.44
SDF4-202ENST00000360001 CREMQ03060 361 aa24.07■■□□□ 1.44
SDF4-202ENST00000360001 EFHC2Q5JST6 749 aa24.07■■□□□ 1.44
SDF4-202ENST00000360001 SND1Q7KZF4 910 aaKnown RBP eCLIP24.07■■□□□ 1.449e-8■□□□□ 11.1
SDF4-202ENST00000360001 GSPT2Q8IYD1 628 aaKnown RBP24.07■■□□□ 1.44
SDF4-202ENST00000360001 TTC13Q8NBP0 860 aa24.07■■□□□ 1.44
SDF4-202ENST00000360001 ATL2Q8NHH9 583 aa24.07■■□□□ 1.44
SDF4-202ENST00000360001 ACTL9Q8TC94 416 aa24.07■■□□□ 1.44
SDF4-202ENST00000360001 RNF139Q8WU17 664 aa24.07■■□□□ 1.44
SDF4-202ENST00000360001 ERP44Q9BS26 406 aa24.07■■□□□ 1.44
SDF4-202ENST00000360001 SFMBT1Q9UHJ3 866 aa24.07■■□□□ 1.44
SDF4-202ENST00000360001 NUDT5Q9UKK9 219 aa24.07■■□□□ 1.44
SDF4-202ENST00000360001 UTP11Q9Y3A2 253 aaKnown RBP24.07■■□□□ 1.44
SDF4-202ENST00000360001 APOC4-APOC2K7ER74 178 aa24.06■■□□□ 1.44
SDF4-202ENST00000360001 APOC2P02655 101 aa24.06■■□□□ 1.44
SDF4-202ENST00000360001 GBP1P32455 592 aa24.06■■□□□ 1.44
SDF4-202ENST00000360001 OTUD4Q01804 1114 aaKnown RBP24.06■■□□□ 1.44
SDF4-202ENST00000360001 SLC9A4Q6AI14 798 aa24.06■■□□□ 1.44
SDF4-202ENST00000360001 MSANTD2Q6P1R3 559 aa24.06■■□□□ 1.44
SDF4-202ENST00000360001 SLC35B2Q8TB61 432 aa24.06■■□□□ 1.44
SDF4-202ENST00000360001 CSPG4P5Q96PW8 444 aa24.06■■□□□ 1.44
SDF4-202ENST00000360001 RAB17Q9H0T7 212 aa24.06■■□□□ 1.44
SDF4-202ENST00000360001 WDCPQ9H6R7 721 aa24.06■■□□□ 1.44
SDF4-202ENST00000360001 CLIC5Q9NZA1 410 aa24.06■■□□□ 1.44
SDF4-202ENST00000360001 CWC15Q9P013 229 aaKnown RBP24.06■■□□□ 1.44
SDF4-202ENST00000360001 RASAL2Q9UJF2 1139 aa24.06■■□□□ 1.44
SDF4-202ENST00000360001 YIPF1Q9Y548 306 aa24.06■■□□□ 1.44
SDF4-202ENST00000360001 ERLIN1O75477 346 aa24.05■■□□□ 1.44
SDF4-202ENST00000360001 PECAM1P16284 738 aaPredicted RBP24.05■■□□□ 1.44
SDF4-202ENST00000360001 CTNNB1P35222 781 aa24.05■■□□□ 1.44
SDF4-202ENST00000360001 BYSLQ13895 437 aaKnown RBP24.05■■□□□ 1.44
SDF4-202ENST00000360001 DUPD1Q68J44 220 aa24.05■■□□□ 1.44
SDF4-202ENST00000360001 PLD5Q8N7P1 536 aa24.05■■□□□ 1.44
SDF4-202ENST00000360001 NKD2Q969F2 451 aaPredicted RBP24.05■■□□□ 1.44
SDF4-202ENST00000360001 FRMD8P1Q9BZ68 369 aaPredicted RBP24.05■■□□□ 1.44
SDF4-202ENST00000360001 TLR8Q9NR97 1041 aaKnown RBP24.05■■□□□ 1.44
SDF4-202ENST00000360001 RCOR3Q9P2K3 495 aaPredicted RBP24.05■■□□□ 1.44
SDF4-202ENST00000360001 SSX2IPQ9Y2D8 614 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms