RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 TMEM79Q9BSE2 394 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 C17orf75Q9HAS0 396 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 RGS18Q9NS28 235 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 COMMD8Q9NX08 183 aa18.88■□□□□ 0.61
SHANK1-202ENST00000359082 GAS2O43903 313 aaKnown RBP18.87■□□□□ 0.61
SHANK1-202ENST00000359082 SUPT20HL2P0C7V6 817 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 ATP6V1C1P21283 382 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 DNAJB2P25686 324 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 ATP12AP54707 1039 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 AGKQ53H12 422 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 SLC20A1Q8WUM9 679 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 CIPCQ9C0C6 399 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 VANGL2Q9ULK5 521 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 ADGRA3Q8IWK6 1321 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 TSPAN3O60637 253 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 ZNF286BP0CG31 522 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 CPA3P15088 417 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 NPTX2P47972 431 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 GRIK3Q13003 919 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 TBCELQ5QJ74 424 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 CCDC149Q6ZUS6 474 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 C16orf62Q7Z3J2 963 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 ANKRD13AQ8IZ07 590 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 EMC1Q8N766 993 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 SEPHS2Q99611 448 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 SERHL2Q9H4I8 314 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 SERHLQ9NQF3 203 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 AVENQ9NQS1 362 aaPredicted RBP18.87■□□□□ 0.61
SHANK1-202ENST00000359082 FBXO28Q9NVF7 368 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 IPPQ9Y573 584 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 MSH3P20585 1137 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 EPHB3P54753 998 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 C11orf88Q6PI97 169 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 MRPL48Q96GC5 212 aaKnown RBP18.87■□□□□ 0.61
SHANK1-202ENST00000359082 DUSP12Q9UNI6 340 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 CEP152O94986 1710 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 SETBP1Q9Y6X0 1596 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 JCHAINP01591 159 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 MYL4P12829 197 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 GTF2A2P52657 109 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 PHF21BQ96EK2 531 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 TMEM176AQ96HP8 235 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 CELF6Q96J87 481 aaKnown RBP18.87■□□□□ 0.61
SHANK1-202ENST00000359082 YME1L1Q96TA2 773 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 TRPM5Q9NZQ8 1165 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 PIPSLA2A3N6 862 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 PEX1O43933 1283 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 LTFP02788 710 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 RBP1P09455 135 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 GSSP48637 474 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 SCNN1BP51168 640 aa18.87■□□□□ 0.61
SHANK1-202ENST00000359082 MRPL42Q9Y6G3 142 aaKnown RBP18.87■□□□□ 0.61
SHANK1-202ENST00000359082 BFSP2Q13515 415 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 RSBN1Q5VWQ0 802 aaPredicted RBP18.86■□□□□ 0.61
SHANK1-202ENST00000359082 PARVBQ9HBI1 364 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 MRPL39Q9NYK5 338 aaKnown RBP18.86■□□□□ 0.61
SHANK1-202ENST00000359082 RAD54BQ9Y620 910 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 MPOP05164 745 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 URODP06132 367 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 DPEP1P16444 411 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 PSMB9P28065 219 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 SLC1A6P48664 564 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 HERVK_113P62684 666 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 DNAAF5Q86Y56 855 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 TERB1Q8NA31 727 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 WDR36Q8NI36 951 aaKnown RBP18.86■□□□□ 0.61
SHANK1-202ENST00000359082 CERKQ8TCT0 537 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 TPH1P17752 444 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 FGFR2P21802 821 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 ITGA9Q13797 1035 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 IZUMO2Q6UXV1 221 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 DAGLBQ8NCG7 672 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 ELMO3Q96BJ8 720 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 MAP3K14Q99558 947 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 TKTL1P51854 596 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 NR6A1Q15406 480 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 RD3Q7Z3Z2 195 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 TRMT11Q7Z4G4 463 aaKnown RBP18.86■□□□□ 0.61
SHANK1-202ENST00000359082 CD302Q8IX05 232 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 OSGEPQ9NPF4 335 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 TAF6LQ9Y6J9 622 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 KLRK1P26718 216 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 SFSWAPQ12872 951 aaKnown RBP18.86■□□□□ 0.61
SHANK1-202ENST00000359082 KRR1Q13601 381 aaKnown RBP18.86■□□□□ 0.61
SHANK1-202ENST00000359082 POU6F1Q14863 301 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 PKN1Q16512 942 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 HIC2Q96JB3 615 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 TBC1D13Q9NVG8 400 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 PIH1D1Q9NWS0 290 aaKnown RBP18.86■□□□□ 0.61
SHANK1-202ENST00000359082 SH3BP4Q9P0V3 963 aa18.86■□□□□ 0.61
SHANK1-202ENST00000359082 UBE2Q2LH0YL09 131 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 NTSR2O95665 410 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 CNTFP26441 200 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 C16orf72Q14CZ0 275 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 FBXO33Q7Z6M2 555 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 VPS33AQ96AX1 596 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 KLHL1Q9NR64 748 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 WDR27A2RRH5 827 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 TRIM43BA6NCK2 446 aa18.85■□□□□ 0.61
SHANK1-202ENST00000359082 F9P00740 461 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms