RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 NACA2Q9H009 215 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 RAB6CQ9H0N0 254 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 DDX43Q9NXZ2 648 aaKnown RBP11.57□□□□□ -0.56
SSU72-202ENST00000359060 CNTN6Q9UQ52 1028 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 FOCADQ5VW36 1801 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.57□□□□□ -0.56
SSU72-202ENST00000359060 MMP3P08254 477 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 YY1P25490 414 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 NUMBP49757 651 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 ZCCHC23Q6ZST2 131 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 ECHDC2Q86YB7 292 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 SHCBP1Q8NEM2 672 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 PPP1R36Q96LQ0 422 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 FAM193BQ96PV7 902 aaPredicted RBP11.57□□□□□ -0.56
SSU72-202ENST00000359060 EPAS1Q99814 870 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 RABGEF1Q9UJ41 708 aa11.57□□□□□ -0.56
SSU72-202ENST00000359060 APOBEC2Q9Y235 224 aaKnown RBP11.57□□□□□ -0.56
SSU72-202ENST00000359060 PAPSS1O43252 624 aaPredicted RBP11.56□□□□□ -0.56
SSU72-202ENST00000359060 CPT1AP50416 773 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 OTOAQ7RTW8 1153 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 SUGP1Q8IWZ8 645 aaKnown RBP11.56□□□□□ -0.56
SSU72-202ENST00000359060 CMASQ8NFW8 434 aaPredicted RBP11.56□□□□□ -0.56
SSU72-202ENST00000359060 GAD1Q99259 594 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 MYCBPQ99417 103 aaPredicted RBP11.56□□□□□ -0.56
SSU72-202ENST00000359060 TMEM120AQ9BXJ8 343 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 BCO2Q9BYV7 579 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 WWP1Q9H0M0 922 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 SDR42E2A6NKP2 422 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 SPECC1L-ADORA2AF8WAN1 911 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 RNF103O00237 685 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 APOEP02649 317 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 LMO2P25791 158 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 MGAT1P26572 445 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 SERPINB3P29508 390 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 SERPINB9P50453 376 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 EPHB1P54762 984 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 ANKRD52Q8NB46 1076 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 FBXO41Q8TF61 875 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 NSMCE1Q8WV22 266 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 APOPT1Q96IL0 206 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 CYP4F11Q9HBI6 524 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 ARMCX1Q9P291 453 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 B2RBV5 119 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 CHADO15335 359 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 EDF1O60869 148 aaKnown RBP11.56□□□□□ -0.56
SSU72-202ENST00000359060 KRT16P08779 473 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 PSEN2P49810 448 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 LACTB2Q53H82 288 aaPredicted RBP11.56□□□□□ -0.56
SSU72-202ENST00000359060 SLC45A4Q5BKX6 768 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 C9orf57Q5W0N0 161 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 TTC30AQ86WT1 665 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 PYROXD2Q8N2H3 581 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 PCDH19Q8TAB3 1148 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 GSDMBQ8TAX9 411 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 ZFP42Q96MM3 310 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 SHCBP1LQ9BZQ2 653 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 STARD13Q9Y3M8 1113 aa11.56□□□□□ -0.56
SSU72-202ENST00000359060 NRCAMQ92823 1304 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 IGKV6-21A0A0C4DH24 114 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 SMIM28A0A1B0GU29 152 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 CCDC22O60826 627 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 ANP32DO95626 131 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 POLBP06746 335 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 MX2P20592 715 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 PGM1P36871 562 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 RABGGTBP53611 331 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 RPL10AP62906 217 aaKnown RBP11.55□□□□□ -0.56
SSU72-202ENST00000359060 C16orf46Q6P387 395 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 UNC93AQ86WB7 457 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 PEBP4Q96S96 227 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 MECRQ9BV79 373 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 KATNAL1Q9BW62 490 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 MTO1Q9Y2Z2 717 aaKnown RBP11.55□□□□□ -0.56
SSU72-202ENST00000359060 SIPA1L1O43166 1804 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 QSER1Q2KHR3 1735 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 TREHO43280 583 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 ABCG1P45844 678 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 GPX6P59796 221 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 XRCC4Q13426 336 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 THOC5Q13769 683 aaKnown RBP11.55□□□□□ -0.56
SSU72-202ENST00000359060 KIRREL3Q8IZU9 778 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 CELF6Q96J87 481 aaKnown RBP11.55□□□□□ -0.56
SSU72-202ENST00000359060 ULBP1Q9BZM6 244 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 WDCPQ9H6R7 721 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 MYO18AQ92614 2054 aaKnown RBP11.55□□□□□ -0.56
SSU72-202ENST00000359060 ASMTLO95671 621 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 MLH1P40692 756 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 TSPY1Q01534 308 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 BTBD8Q5XKL5 378 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 ZDHHC17Q8IUH5 632 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 NAT8LQ8N9F0 302 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 B3GALNT2Q8NCR0 500 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 CCDC124Q96CT7 223 aaKnown RBP11.55□□□□□ -0.56
SSU72-202ENST00000359060 SYT15Q9BQS2 421 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 CACNG4Q9UBN1 327 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 GRID1Q9ULK0 1009 aa11.55□□□□□ -0.56
SSU72-202ENST00000359060 A8MUI8 341 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 TCEA3O75764 348 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 THP07101 528 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 DARSP14868 501 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms