RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 UFL1O94874 794 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 CXCR2P25025 360 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 HSPA1LP34931 641 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 PTK2BQ14289 1009 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 SMU1Q2TAY7 513 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 CBWD6Q4V339 395 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 CBWD3Q5JTY5 395 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 CBWD5Q5RIA9 395 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 BTLAQ7Z6A9 289 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 UBE2Q1Q7Z7E8 422 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 OSTM1Q86WC4 334 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 ZNF420Q8TAQ5 688 aaPredicted RBP11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 ACDQ96AP0 544 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 POLR1BQ9H9Y6 1135 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 MOV10Q9HCE1 1003 aaKnown RBP11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 GDAP2Q9NXN4 497 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 STK39Q9UEW8 545 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 C10orf71Q711Q0 1435 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 POTEB3A0JP26 581 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 SNAP91O60641 907 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 TOM1L1O75674 476 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 TSPAN9O75954 239 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 MTA2O94776 668 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 CSPG5O95196 566 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 GCNT3O95395 438 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 CCNA2P20248 432 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 ACAT1P24752 427 aaKnown RBP11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 EEF1DP29692 281 aaKnown RBP11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 ADSSP30520 456 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 FOXD4Q12950 439 aaPredicted RBP11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 PMS2P3Q13401 168 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 SLC35G1Q2M3R5 365 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 CAVIN4Q5BKX8 364 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 UBE2UQ5VVX9 321 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 POTEBQ6S5H4 581 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 DSG4Q86SJ6 1040 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 RALGPS2Q86X27 583 aaPredicted RBP11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 CARM1Q86X55 608 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 RHPN2Q8IUC4 686 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 HCAR2Q8TDS4 363 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 C20orf27Q9GZN8 174 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 SPEF1Q9Y4P9 236 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 PPME1Q9Y570 386 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 ASTN2O75129 1339 aaPredicted RBP11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 TMEM2Q9UHN6 1383 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 PLOD2O00469 737 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 SLC16A3O15427 465 aaKnown RBP11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 KCNH1O95259 989 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 ZNF26P17031 533 aaPredicted RBP11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 PSMC2P35998 433 aaKnown RBP11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 HPCAL1P37235 193 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 BCAMP50895 628 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 NFATC3Q12968 1075 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 MORF4L2Q15014 288 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 TCEAL1Q15170 157 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 DGKDQ16760 1214 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 BBS9Q3SYG4 887 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 MGAT5BQ3V5L5 792 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 FAM47CQ5HY64 1035 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 SLC10A5Q5PT55 438 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 ATAD3BQ5T9A4 648 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 BTBD8Q5XKL5 378 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 LMOD2Q6P5Q4 547 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 AKAP14Q86UN6 197 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 KBTBD7Q8WVZ9 684 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 ZNF641Q96N77 438 aaPredicted RBP11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 HOMER2Q9NSB8 354 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 TRAF6Q9Y4K3 522 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 RGPD2P0DJD1 1756 aa11.76□□□□□ -0.53
SEPSECS-201ENST00000358971 NRXN3Q9Y4C0 1643 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 SYCE1LA8MT33 242 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 XRCC1P18887 633 aaPredicted RBP11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 HOXD10P28358 340 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 NMT1P30419 496 aaKnown RBP11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 MYL7Q01449 175 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 KCNA1Q09470 495 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 RAB39AQ14964 217 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 SUZ12Q15022 739 aaKnown RBP11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 NEDD8Q15843 81 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 PARP10Q53GL7 1025 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 CES4AQ5XG92 561 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 KIF6Q6ZMV9 814 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 PRR23CQ6ZRP0 262 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 ZSWIM2Q8NEG5 633 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 RAPGEF4Q8WZA2 1011 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 CDRT15Q96T59 188 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 BRIP1Q9BX63 1249 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 IKZF4Q9H2S9 585 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 WDR6Q9NNW5 1121 aaKnown RBP11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 ZNF229Q9UJW7 825 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 DSEQ9UL01 958 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 MSI1O43347 362 aaKnown RBP11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 SGPL1O95470 568 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 ERBB2P04626 1255 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 MSL3P1P0C860 447 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 PCP11498 1178 aaKnown RBP11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 BMP3P12645 472 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 PRKCAP17252 672 aa11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 POLR2BP30876 1174 aaKnown RBP11.75□□□□□ -0.53
SEPSECS-201ENST00000358971 NUDT2P50583 147 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms