RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 MPP5Q8N3R9 675 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 ENDOVQ8N8Q3 282 aaKnown RBP6.79□□□□□ -1.32
CSDE1-203ENST00000358528 KIF12Q96FN5 646 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 HPDLQ96IR7 371 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 DNAJC1Q96KC8 554 aaKnown RBP6.79□□□□□ -1.32
CSDE1-203ENST00000358528 TEX13BQ9BXU2 312 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 ZNF518BQ9C0D4 1074 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 HAPLN2Q9GZV7 340 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 PORCNQ9H237 461 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 THAP1Q9NVV9 213 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 KANSL3Q9P2N6 904 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 HMGXB4Q9UGU5 601 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 FAF1Q9UNN5 650 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-203ENST00000358528 CAPN8A6NHC0 703 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 TM7SF2O76062 418 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 MT-CO1P00395 513 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 NFICP08651 508 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 RALBP11234 206 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 NUMBP49757 651 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 OCRLQ01968 901 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 LAMTOR4Q0VGL1 99 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 PDCD2Q16342 344 aaPredicted RBP6.79□□□□□ -1.32
CSDE1-203ENST00000358528 FSCBQ5H9T9 825 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 KCNT2Q6UVM3 1135 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 UNC5AQ6ZN44 842 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 ARHGAP22Q7Z5H3 698 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 KBTBD2Q8IY47 623 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 GALNT15Q8N3T1 639 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 ADAM32Q8TC27 787 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 PIWIL2Q8TC59 973 aaKnown RBP6.79□□□□□ -1.32
CSDE1-203ENST00000358528 PPP1R13LQ8WUF5 828 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 CNKSR2Q8WXI2 1034 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 CMTM5Q96DZ9 223 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 CNPY3Q9BT09 278 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 GRIP2Q9C0E4 1043 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 TRPV6Q9H1D0 765 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 ZNF358Q9NW07 568 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 GTSE1Q9NYZ3 720 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 UBP1Q9NZI7 540 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 TSPAN16Q9UKR8 245 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 HBS1LQ9Y450 684 aaKnown RBP6.79□□□□□ -1.32
CSDE1-203ENST00000358528 CNTNAP2Q9UHC6 1331 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 MAST2Q6P0Q8 1798 aa6.79□□□□□ -1.32
CSDE1-203ENST00000358528 KCNK1O00180 336 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 ITM2AO43736 263 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 SEC24DO94855 1032 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-203ENST00000358528 CYP2F1P24903 491 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 ABCD1P33897 745 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 RAB27AP51159 221 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 EFNA5P52803 228 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 NDST1P52848 882 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 AQP4P55087 323 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 PDE1CQ14123 709 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-203ENST00000358528 FLOT2Q14254 428 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 SPDYAQ5MJ70 313 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 B3GNT9Q6UX72 402 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 NET1Q7Z628 596 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-203ENST00000358528 DHDDSQ86SQ9 333 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 C10orf107Q8IVU9 208 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 RDM1Q8NG50 284 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 ZSCAN18Q8TBC5 510 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-203ENST00000358528 PTCD3Q96EY7 689 aaKnown RBP6.78□□□□□ -1.32
CSDE1-203ENST00000358528 TMEM176AQ96HP8 235 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 PGLYRP2Q96PD5 576 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 NDNQ99608 321 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 GORASP1Q9BQQ3 440 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 B3GNT5Q9BYG0 378 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 FAM49AQ9H0Q0 323 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-203ENST00000358528 ARFGEF1Q9Y6D6 1849 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 KDM4FA0A1W2PPD8 638 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 PMM2O15305 246 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 FKBP6O75344 327 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 GPC4O75487 556 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 CHRM1P11229 460 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-203ENST00000358528 KCNA2P16389 499 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 AP3M2P53677 418 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 ATXN1P54253 815 aaKnown RBP6.78□□□□□ -1.32
CSDE1-203ENST00000358528 GBE1Q04446 702 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 POU5F1BQ06416 359 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 DBN1Q16643 649 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 DPY19L2Q6NUT2 758 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 EFCAB12Q6NXP0 572 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 FAM183BPQ6ZVS7 135 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 TMEM192Q8IY95 271 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 KIAA0319LQ8IZA0 1049 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 PHC3Q8NDX5 983 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 USP33Q8TEY7 942 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 EXT2Q93063 718 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 SKA1Q96BD8 255 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 MOCOSQ96EN8 888 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 RNF157Q96PX1 679 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 SERPINI1Q99574 410 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 PRPF18Q99633 342 aaKnown RBP6.78□□□□□ -1.32
CSDE1-203ENST00000358528 NTPCRQ9BSD7 190 aaKnown RBP6.78□□□□□ -1.32
CSDE1-203ENST00000358528 MED10Q9BTT4 135 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 COPS7BQ9H9Q2 264 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-203ENST00000358528 MYOZ2Q9NPC6 264 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 C20orf96Q9NUD7 363 aaPredicted RBP6.78□□□□□ -1.32
CSDE1-203ENST00000358528 BTBD7Q9P203 1132 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 SLC39A10Q9ULF5 831 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms