RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 SIK2Q9H0K1 926 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 JMJD4Q9H9V9 463 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 MRPL39Q9NYK5 338 aaKnown RBP9.01□□□□□ -0.97
COL6A6-201ENST00000358511 TNFRSF21O75509 655 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 TRMUO75648 421 aaKnown RBP9.01□□□□□ -0.97
COL6A6-201ENST00000358511 DDHD2O94830 711 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 ASNSP08243 561 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 RPA1P27694 616 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 AVPR1AP37288 418 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 MAGEA10P43363 369 aaPredicted RBP9.01□□□□□ -0.97
COL6A6-201ENST00000358511 RAD51Q06609 339 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 BOLA3Q53S33 107 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 CYP4A22Q5TCH4 519 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 KIAA0408Q6ZU52 694 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 FOXP4Q8IVH2 680 aaPredicted RBP9.01□□□□□ -0.97
COL6A6-201ENST00000358511 DYRK4Q9NR20 520 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 CHORDC1Q9UHD1 332 aaPredicted RBP9.01□□□□□ -0.97
COL6A6-201ENST00000358511 WDR37Q9Y2I8 494 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 SERPINA6P08185 405 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 RBP1P09455 135 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 TCF3P15923 654 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 ZNF12P17014 697 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 KDELC2Q7Z4H8 507 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 YIPF2Q9BWQ6 316 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 PTTG2Q9NZH5 202 aa9.01□□□□□ -0.97
COL6A6-201ENST00000358511 MAGEB2O15479 319 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 SP100P23497 879 aaPredicted RBP9□□□□□ -0.97
COL6A6-201ENST00000358511 FOXO4P98177 505 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 FBXW8Q8N3Y1 598 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 PSMA8Q8TAA3 256 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 ZNF560Q96MR9 790 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 DDX50Q9BQ39 737 aaKnown RBP9□□□□□ -0.97
COL6A6-201ENST00000358511 WDR41Q9HAD4 459 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 CARD8Q9Y2G2 431 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 CLTCQ00610 1675 aaKnown RBP9□□□□□ -0.97
COL6A6-201ENST00000358511 GH2P01242 217 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 SHBGP04278 402 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 RECQLP46063 649 aaPredicted RBP9□□□□□ -0.97
COL6A6-201ENST00000358511 GALK1P51570 392 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 LACTB2Q53H82 288 aaPredicted RBP9□□□□□ -0.97
COL6A6-201ENST00000358511 GJB7Q6PEY0 223 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 TMEM26Q6ZUK4 368 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 DENND5BQ6ZUT9 1274 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 WRNIP1Q96S55 665 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 OSBPL10Q9BXB5 764 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 RNF112Q9ULX5 631 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 TELO2Q9Y4R8 837 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 METP08581 1390 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 PDE2AO00408 941 aaPredicted RBP9□□□□□ -0.97
COL6A6-201ENST00000358511 C2CD2LO14523 706 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 PRDX5P30044 214 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 RAB15P59190 212 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 VAC14Q08AM6 782 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 PERM1Q5SV97 790 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 TTC7BQ86TV6 843 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 FBXL16Q8N461 479 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 PROX1Q92786 737 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 SEPHS2Q99611 448 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 ROGDIQ9GZN7 287 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 KCTD10Q9H3F6 313 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 USP18Q9UMW8 372 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 PCDHA10Q9Y5I2 948 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 SF3B1O75533 1304 aaKnown RBP eCLIP9□□□□□ -0.97
COL6A6-201ENST00000358511 GRAP2O75791 330 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 IL18RAPO95256 599 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 LSM8O95777 96 aaKnown RBP9□□□□□ -0.97
COL6A6-201ENST00000358511 LRPAP1P30533 357 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 GTF2H3Q13889 308 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 THOC7Q6I9Y2 204 aaKnown RBP9□□□□□ -0.97
COL6A6-201ENST00000358511 CATSPER4Q7RTX7 472 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 NIF3L1Q9GZT8 377 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 ABCB10Q9NRK6 738 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 RUVBL2Q9Y230 463 aaKnown RBP9□□□□□ -0.97
COL6A6-201ENST00000358511 LOC100506127A0A0U1RQW1 187 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 SUPT7LO94864 414 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 ANXA6P08133 673 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 ABHD2P08910 425 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 HIST1H2AGP0C0S8 130 aaPredicted RBP9□□□□□ -0.97
COL6A6-201ENST00000358511 HIST1H2ADP20671 130 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 MUTP22033 750 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 ADRA1DP25100 572 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 PRIM2P49643 509 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 CUL2Q13617 745 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 EPHA7Q15375 998 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 SH3BP5LQ7L8J4 393 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 AHI1Q8N157 1196 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 HIST1H2AHQ96KK5 128 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 NSMCE2Q96MF7 247 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 HIST1H2AJQ99878 128 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 H2AFJQ9BTM1 129 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 SEMA6BQ9H3T3 888 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 CROTQ9UKG9 612 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 CD3EAPO15446 510 aaKnown RBP9□□□□□ -0.97
COL6A6-201ENST00000358511 ZC3H11AO75152 810 aaKnown RBP eCLIP9□□□□□ -0.97
COL6A6-201ENST00000358511 MAPK1P28482 360 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 HPCAP84074 193 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 DPYSQ14117 519 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 Q3C1V9 767 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 PPP1R16BQ96T49 567 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 RAB26Q9ULW5 256 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms