RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 APOBEC2Q9Y235 224 aaKnown RBP10.49□□□□□ -0.73
PTPRA-203ENST00000356147 POMPQ9Y244 141 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 INPP5FQ9Y2H2 1132 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 LRRC37AA6NMS7 1700 aa10.49□□□□□ -0.73
PTPRA-203ENST00000356147 ANKRD31Q8N7Z5 1873 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 UQCRBP14927 111 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 PDGFRAP16234 1089 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 ASPAP45381 313 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 SLC1A6P48664 564 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 ATXN1P54253 815 aaKnown RBP10.48□□□□□ -0.73
PTPRA-203ENST00000356147 TUBB3Q13509 450 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 OLIG2Q13516 323 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 TTLL12Q14166 644 aaPredicted RBP10.48□□□□□ -0.73
PTPRA-203ENST00000356147 NOMO1Q15155 1222 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 TMCO4Q5TGY1 634 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 OR6B2Q6IFH4 312 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 ACAD11Q709F0 780 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 C10orf107Q8IVU9 208 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 WDR75Q8IWA0 830 aaKnown RBP10.48□□□□□ -0.73
PTPRA-203ENST00000356147 NIPA2Q8N8Q9 360 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 RXFP2Q8WXD0 754 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 HIC2Q96JB3 615 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 VCX3BQ9H321 246 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 VCX3AQ9NNX9 186 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 CDH22Q9UJ99 828 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 MFHAS1Q9Y4C4 1052 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 PSAT1Q9Y617 370 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 LOXHD1Q8IVV2 1947 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 A0A1B0GTW7 788 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 NEMP1O14524 444 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 TPP1O14773 563 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 AIM2O14862 343 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 KLF11O14901 512 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 ADCY3O60266 1144 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 KRT38O76015 456 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 LSM8O95777 96 aaKnown RBP10.48□□□□□ -0.73
PTPRA-203ENST00000356147 NELFEP18615 380 aaKnown RBP10.48□□□□□ -0.73
PTPRA-203ENST00000356147 EIF4BP23588 611 aaKnown RBP10.48□□□□□ -0.73
PTPRA-203ENST00000356147 POLR2BP30876 1174 aaKnown RBP10.48□□□□□ -0.73
PTPRA-203ENST00000356147 BCAR1P56945 870 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 SESN2P58004 480 aaPredicted RBP10.48□□□□□ -0.73
PTPRA-203ENST00000356147 FOLH1Q04609 750 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 DYNC1I2Q13409 638 aaKnown RBP10.48□□□□□ -0.73
PTPRA-203ENST00000356147 TEDDM1Q5T9Z0 273 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 PRAMEF18Q5VWM3 479 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 ABHD15Q6UXT9 468 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 RBM44Q6ZP01 1051 aaKnown RBP10.48□□□□□ -0.73
PTPRA-203ENST00000356147 PLD5Q8N7P1 536 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 CMASQ8NFW8 434 aaPredicted RBP10.48□□□□□ -0.73
PTPRA-203ENST00000356147 FAM81AQ8TBF8 368 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 PIWIL2Q8TC59 973 aaKnown RBP10.48□□□□□ -0.73
PTPRA-203ENST00000356147 GRIP2Q9C0E4 1043 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 PORCNQ9H237 461 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 BTBD7Q9P203 1132 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 PPME1Q9Y570 386 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 SLC4A7Q9Y6M7 1214 aa10.48□□□□□ -0.73
PTPRA-203ENST00000356147 WDR27A2RRH5 827 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 CFLARO15519 480 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 B4GALT5O43286 388 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 SNNO75324 88 aaPredicted RBP10.47□□□□□ -0.73
PTPRA-203ENST00000356147 TRPA1O75762 1119 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 ITGA9Q13797 1035 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 TLR1Q15399 786 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 DUOXA2Q1HG44 320 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 XKR3Q5GH77 459 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 LGSNQ5TDP6 509 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 SLFN12LQ6IEE8 588 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 CMC1Q7Z7K0 106 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 GALNT4Q8N4A0 578 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 PRPF31Q8WWY3 499 aaKnown RBP10.47□□□□□ -0.73
PTPRA-203ENST00000356147 CNBD2Q96M20 576 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 ZNF277Q9NRM2 450 aaPredicted RBP10.47□□□□□ -0.73
PTPRA-203ENST00000356147 THAP1Q9NVV9 213 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 EMCNQ9ULC0 261 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 AFG3L2Q9Y4W6 797 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 C15orf38-AP3S2A0A0A6YYH1 394 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 CREB3O43889 395 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 FKBP6O75344 327 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 MICAL2O94851 1124 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 ATG7O95352 703 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 GSRP00390 522 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 TFE3P19532 575 aaPredicted RBP10.47□□□□□ -0.73
PTPRA-203ENST00000356147 ITGAXP20702 1163 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 SERPINB5P36952 375 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 YWHAEP62258 255 aaKnown RBP10.47□□□□□ -0.73
PTPRA-203ENST00000356147 GBE1Q04446 702 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 TBL3Q12788 808 aaKnown RBP10.47□□□□□ -0.73
PTPRA-203ENST00000356147 LSAMPQ13449 338 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 PPM1LQ5SGD2 360 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 PDPK2PQ6A1A2 396 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 ARPINQ7Z6K5 226 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 TRIM50Q86XT4 487 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 SPNS2Q8IVW8 549 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 BRSK2Q8IWQ3 736 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 NLGN1Q8N2Q7 840 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 PQLC3Q8N755 202 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 C12orf29Q8N999 325 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 TFB1MQ8WVM0 346 aaKnown RBP10.47□□□□□ -0.73
PTPRA-203ENST00000356147 DEFB129Q9H1M3 183 aa10.47□□□□□ -0.73
PTPRA-203ENST00000356147 RSAD1Q9HA92 442 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms