RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 RALAP11233 206 aa17.53■□□□□ 0.4
PDLIM7-201ENST00000355572 SLC9A1P19634 815 aa17.53■□□□□ 0.4
PDLIM7-201ENST00000355572 TNFRSF4P43489 277 aa17.53■□□□□ 0.4
PDLIM7-201ENST00000355572 PSEN1P49768 467 aa17.53■□□□□ 0.4
PDLIM7-201ENST00000355572 DAOAP59103 153 aa17.53■□□□□ 0.4
PDLIM7-201ENST00000355572 DENND1CQ8IV53 801 aa17.53■□□□□ 0.4
PDLIM7-201ENST00000355572 KCTD13Q8WZ19 329 aa17.53■□□□□ 0.4
PDLIM7-201ENST00000355572 ZC3H10Q96K80 434 aaKnown RBP17.53■□□□□ 0.4
PDLIM7-201ENST00000355572 CLSTN2Q9H4D0 955 aa17.53■□□□□ 0.4
PDLIM7-201ENST00000355572 CD93Q9NPY3 652 aa17.53■□□□□ 0.4
PDLIM7-201ENST00000355572 DEC1Q9P2X7 70 aa17.53■□□□□ 0.4
PDLIM7-201ENST00000355572 TJP2Q9UDY2 1190 aa17.53■□□□□ 0.4
PDLIM7-201ENST00000355572 CYTH4Q9UIA0 394 aa17.53■□□□□ 0.4
PDLIM7-201ENST00000355572 FBXO10Q9UK96 956 aa17.53■□□□□ 0.4
PDLIM7-201ENST00000355572 CNTN6Q9UQ52 1028 aa17.53■□□□□ 0.4
PDLIM7-201ENST00000355572 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.53■□□□□ 0.4
PDLIM7-201ENST00000355572 M0QYV0 167 aa17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 SGSHP51688 502 aa17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 ATXN1P54253 815 aaKnown RBP17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 YWHAEP62258 255 aaKnown RBP17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 GCNT1Q02742 428 aa17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 CNGA2Q16280 664 aa17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 DPCR1Q3MIW9 517 aa17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 BSPRYQ5W0U4 402 aa17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 GRAMD4Q6IC98 578 aa17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 TCEAL6Q6IPX3 200 aa17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 KIAA1211LQ6NV74 962 aa17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 DPY19L2P1Q6NXN4 242 aa17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 DENND1BQ6P3S1 775 aa17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 PRR23CQ6ZRP0 262 aa17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 CACNA2D4Q7Z3S7 1137 aa17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 FMNL3Q8IVF7 1028 aa17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 ZNF513Q8N8E2 541 aaPredicted RBP17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 OLIG1Q8TAK6 271 aa17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 TCEAL3Q969E4 200 aa17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 EXOC4Q96A65 974 aa17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 LRRC4Q9HBW1 653 aa17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 HESX1Q9UBX0 185 aa17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 MBD1Q9UIS9 605 aaPredicted RBP17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 LSM7Q9UK45 103 aaKnown RBP17.52■□□□□ 0.4
PDLIM7-201ENST00000355572 A0A1W2PQF6 199 aa17.51■□□□□ 0.39
PDLIM7-201ENST00000355572 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.51■□□□□ 0.39
PDLIM7-201ENST00000355572 WASH3PC4AMC7 463 aa17.51■□□□□ 0.39
PDLIM7-201ENST00000355572 GFRA2O00451 464 aa17.51■□□□□ 0.39
PDLIM7-201ENST00000355572 PENKP01210 267 aaPredicted RBP17.51■□□□□ 0.39
PDLIM7-201ENST00000355572 FYNP06241 537 aa17.51■□□□□ 0.39
PDLIM7-201ENST00000355572 SETSIPP0DME0 302 aa17.51■□□□□ 0.39
PDLIM7-201ENST00000355572 TRIP4Q15650 581 aaPredicted RBP17.51■□□□□ 0.39
PDLIM7-201ENST00000355572 CSRP2Q16527 193 aa17.51■□□□□ 0.39
PDLIM7-201ENST00000355572 GEN1Q17RS7 908 aa17.51■□□□□ 0.39
PDLIM7-201ENST00000355572 PLA2G2CQ5R387 149 aa17.51■□□□□ 0.39
PDLIM7-201ENST00000355572 BTBD8Q5XKL5 378 aa17.51■□□□□ 0.39
PDLIM7-201ENST00000355572 FAM217AQ8IXS0 508 aa17.51■□□□□ 0.39
PDLIM7-201ENST00000355572 MYEOVQ96EZ4 313 aa17.51■□□□□ 0.39
PDLIM7-201ENST00000355572 SLC6A17Q9H1V8 727 aa17.51■□□□□ 0.39
PDLIM7-201ENST00000355572 SIX2Q9NPC8 291 aa17.51■□□□□ 0.39
PDLIM7-201ENST00000355572 NYNRINQ9P2P1 1898 aaKnown RBP17.51■□□□□ 0.39
PDLIM7-201ENST00000355572 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.5■□□□□ 0.39
PDLIM7-201ENST00000355572 TCRBV21S2A2A0A5A6 115 aa17.5■□□□□ 0.39
PDLIM7-201ENST00000355572 GNA14O95837 355 aa17.5■□□□□ 0.39
PDLIM7-201ENST00000355572 PNMA6AP0CW24 399 aaPredicted RBP17.5■□□□□ 0.39
PDLIM7-201ENST00000355572 GABRG2P18507 467 aa17.5■□□□□ 0.39
PDLIM7-201ENST00000355572 HSP90AA4PQ58FG1 418 aa17.5■□□□□ 0.39
PDLIM7-201ENST00000355572 TRIM65Q6PJ69 517 aa17.5■□□□□ 0.39
PDLIM7-201ENST00000355572 RSRC2Q7L4I2 434 aaKnown RBP17.5■□□□□ 0.39
PDLIM7-201ENST00000355572 HMGB4Q8WW32 186 aa17.5■□□□□ 0.39
PDLIM7-201ENST00000355572 PIWIL1Q96J94 861 aaKnown RBP17.5■□□□□ 0.39
PDLIM7-201ENST00000355572 UBE2TQ9NPD8 197 aaPredicted RBP17.5■□□□□ 0.39
PDLIM7-201ENST00000355572 LMBRD1Q9NUN5 540 aa17.5■□□□□ 0.39
PDLIM7-201ENST00000355572 STARD13Q9Y3M8 1113 aa17.5■□□□□ 0.39
PDLIM7-201ENST00000355572 RAD54BQ9Y620 910 aa17.5■□□□□ 0.39
PDLIM7-201ENST00000355572 PI4KAP42356 2102 aa17.5■□□□□ 0.39
PDLIM7-201ENST00000355572 CACNA1AO00555 2505 aa17.49■□□□□ 0.39
PDLIM7-201ENST00000355572 DCDC2BA2VCK2 349 aa17.49■□□□□ 0.39
PDLIM7-201ENST00000355572 TSPAN3O60637 253 aa17.49■□□□□ 0.39
PDLIM7-201ENST00000355572 GPD2P43304 727 aa17.49■□□□□ 0.39
PDLIM7-201ENST00000355572 RPL34P49207 117 aaKnown RBP17.49■□□□□ 0.39
PDLIM7-201ENST00000355572 DGKGP49619 791 aa17.49■□□□□ 0.39
PDLIM7-201ENST00000355572 MFAP3P55082 362 aa17.49■□□□□ 0.39
PDLIM7-201ENST00000355572 COG7P83436 770 aa17.49■□□□□ 0.39
PDLIM7-201ENST00000355572 GOLGA8FQ08AF8 430 aa17.49■□□□□ 0.39
PDLIM7-201ENST00000355572 GOLGA8DPQ0D2H9 430 aa17.49■□□□□ 0.39
PDLIM7-201ENST00000355572 PUM1Q14671 1186 aaKnown RBP eCLIP17.49■□□□□ 0.393e-7■□□□□ 10.6
PDLIM7-201ENST00000355572 MAP7D1Q3KQU3 841 aa17.49■□□□□ 0.39
PDLIM7-201ENST00000355572 PMS2CLQ68D20 193 aa17.49■□□□□ 0.39
PDLIM7-201ENST00000355572 TMEM215Q68D42 235 aa17.49■□□□□ 0.39
PDLIM7-201ENST00000355572 CREBRFQ8IUR6 639 aa17.49■□□□□ 0.39
PDLIM7-201ENST00000355572 SCML4Q8N228 414 aa17.49■□□□□ 0.39
PDLIM7-201ENST00000355572 ARHGAP18Q8N392 663 aa17.49■□□□□ 0.39
PDLIM7-201ENST00000355572 DNAI2Q9GZS0 605 aa17.49■□□□□ 0.39
PDLIM7-201ENST00000355572 MIS12Q9H081 205 aa17.49■□□□□ 0.39
PDLIM7-201ENST00000355572 CNGB3Q9NQW8 809 aa17.49■□□□□ 0.39
PDLIM7-201ENST00000355572 CACNA2D2Q9NY47 1150 aa17.49■□□□□ 0.39
PDLIM7-201ENST00000355572 KIAA1257Q9ULG3 409 aa17.49■□□□□ 0.39
PDLIM7-201ENST00000355572 GOLGA6L7A0A1B0GV03 622 aa17.48■□□□□ 0.39
PDLIM7-201ENST00000355572 PATE3B3GLJ2 98 aa17.48■□□□□ 0.39
PDLIM7-201ENST00000355572 LRP3O75074 770 aa17.48■□□□□ 0.39
PDLIM7-201ENST00000355572 KRT5P13647 590 aa17.48■□□□□ 0.39
PDLIM7-201ENST00000355572 PON1P27169 355 aa17.48■□□□□ 0.39
PDLIM7-201ENST00000355572 MPLP40238 635 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms