RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 FAM110CQ1W6H9 321 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 LRRC74BQ6ZQY2 392 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 STXBP4Q6ZWJ1 553 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 GTF3C2Q8WUA4 911 aaPredicted RBP11.21□□□□□ -0.62
SND1-201ENST00000354725 RIT2Q99578 217 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 ZNF184Q99676 751 aaPredicted RBP11.21□□□□□ -0.62
SND1-201ENST00000354725 WDR11Q9BZH6 1224 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 LRMDAQ9H2I8 198 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 ATP13A3Q9H7F0 1226 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 UVRAGQ9P2Y5 699 aa11.21□□□□□ -0.62
SND1-201ENST00000354725 NFASCO94856 1347 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 EMSYQ7Z589 1322 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 O00370 1275 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 GMNNO75496 209 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 EIF2B2P49770 351 aaKnown RBP11.2□□□□□ -0.62
SND1-201ENST00000354725 CETN1Q12798 172 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 PTK6Q13882 451 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 CEP55Q53EZ4 464 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 ARHGEF18Q6ZSZ5 1173 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 HS2ST1Q7LGA3 356 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 NIPA1Q7RTP0 329 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 SATL1Q86VE3 508 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 ATG4CQ96DT6 458 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 RBM18Q96H35 190 aaKnown RBP11.2□□□□□ -0.62
SND1-201ENST00000354725 FBXL18Q96ME1 805 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 PRMT1Q99873 361 aaKnown RBP11.2□□□□□ -0.62
SND1-201ENST00000354725 NUP85Q9BW27 656 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 VPS45Q9NRW7 570 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 TMCC2O75069 709 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 PABPC1P11940 636 aaKnown RBP11.2□□□□□ -0.62
SND1-201ENST00000354725 VAMP7P51809 220 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 RAB15P59190 212 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 AP1B1Q10567 949 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 ACVR2BQ13705 512 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 SYDE1Q6ZW31 735 aaPredicted RBP11.2□□□□□ -0.62
SND1-201ENST00000354725 FAM160B2Q86V87 743 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 CPNE8Q86YQ8 564 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 ANKMY2Q8IV38 441 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 TEX19Q8NA77 164 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 COX4I2Q96KJ9 171 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 TMEM117Q9H0C3 514 aa11.2□□□□□ -0.62
SND1-201ENST00000354725 DENND2DQ9H6A0 471 aaPredicted RBP11.2□□□□□ -0.62
SND1-201ENST00000354725 RPL26L1Q9UNX3 145 aaKnown RBP11.2□□□□□ -0.62
SND1-201ENST00000354725 VILLO15195 856 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 RGS16O15492 202 aaPredicted RBP11.19□□□□□ -0.62
SND1-201ENST00000354725 SGPL1O95470 568 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 OSBPP22059 807 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 ADSSP30520 456 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 GRIA2P42262 883 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 STAT2P52630 851 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 STRA8Q7Z7C7 330 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 CCDC25Q86WR0 208 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 BRSK1Q8TDC3 778 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 TIFAQ96CG3 184 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 MED30Q96HR3 178 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 PSKH2Q96QS6 385 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 TMEM206Q9H813 350 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 USP29Q9HBJ7 922 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 TXLNGQ9NUQ3 528 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 GJD2Q9UKL4 321 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 ACTL7BQ9Y614 415 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 TMEM114B3SHH9 223 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 EVI2BP34910 448 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 HADHAP40939 763 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 C15orf59Q2T9L4 293 aaPredicted RBP11.19□□□□□ -0.62
SND1-201ENST00000354725 WDR44Q5JSH3 913 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 MORN1Q5T089 497 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 ERAP2Q6P179 960 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 SLC30A10Q6XR72 485 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 NAT8LQ8N9F0 302 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 ZSWIM2Q8NEG5 633 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 CKAP2Q8WWK9 683 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 CLEC4DQ8WXI8 215 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 PPP1R36Q96LQ0 422 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 LXNQ9BS40 222 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 TRIM31Q9BZY9 425 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 STMN4Q9H169 189 aaPredicted RBP11.19□□□□□ -0.62
SND1-201ENST00000354725 OSBPL2Q9H1P3 480 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 CDC42EP4Q9H3Q1 356 aaKnown RBP11.19□□□□□ -0.62
SND1-201ENST00000354725 ZFYVE28Q9HCC9 887 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 FAF1Q9UNN5 650 aaPredicted RBP11.19□□□□□ -0.62
SND1-201ENST00000354725 COQ6Q9Y2Z9 468 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 GPR25O00155 361 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 ARP10275 920 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 UNGP13051 313 aaPredicted RBP11.19□□□□□ -0.62
SND1-201ENST00000354725 BTF3P20290 206 aaKnown RBP11.19□□□□□ -0.62
SND1-201ENST00000354725 CYP2J2P51589 502 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 MPP2Q14168 576 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 NPAS4Q8IUM7 802 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 TPH2Q8IWU9 490 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 PRPF31Q8WWY3 499 aaKnown RBP11.19□□□□□ -0.62
SND1-201ENST00000354725 ALKBH8Q96BT7 664 aaKnown RBP11.19□□□□□ -0.62
SND1-201ENST00000354725 TMEM237Q96Q45 408 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 HERPUD2Q9BSE4 406 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 UBE2TQ9NPD8 197 aaPredicted RBP11.19□□□□□ -0.62
SND1-201ENST00000354725 INTS9Q9NV88 658 aaKnown RBP11.19□□□□□ -0.62
SND1-201ENST00000354725 CRNNQ9UBG3 495 aaPredicted RBP11.19□□□□□ -0.62
SND1-201ENST00000354725 EXOC7Q9UPT5 735 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 PRKAB1Q9Y478 270 aa11.19□□□□□ -0.62
SND1-201ENST00000354725 RIPK3Q9Y572 518 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms