RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 DIS3L2Q8IYB7 885 aaKnown RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 CMTM4Q8IZR5 234 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 SCML4Q8N228 414 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 FNIP1Q8TF40 1166 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 MZB1Q8WU39 189 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 USP6NLQ92738 828 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 TFAP2CQ92754 450 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 KTI12Q96EK9 354 aaPredicted RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 FAM84AQ96KN4 292 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 GPATCH1Q9BRR8 931 aaKnown RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 L2HGDHQ9H9P8 463 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 XPNPEP3Q9NQH7 507 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 CTTNBP2NLQ9P2B4 639 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 NDRG4Q9ULP0 352 aaKnown RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 CAPN11Q9UMQ6 739 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 TBX20Q9UMR3 447 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 VPS4AQ9UN37 437 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 KDM5AP29375 1690 aaKnown RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 EFCAB6Q5THR3 1501 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 RTEL1-TNFRSF6BF6WH68 1400 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 LOC105369274A0A096LPK9 316 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 LOC102723532A0A0G2JNH3 316 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 A0A1W2PQ09 198 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 FAM90A7PA6NKC0 464 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 FAM90A22PA8MWA6 464 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 FAM90A12PA8MX19 464 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 FAM90A23PA8MXZ1 464 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 PPM1DO15297 605 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 RHOP08100 348 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 ELANEP08246 267 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 GCH1P30793 250 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 THBS4P35443 961 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 GCLCP48506 637 aaPredicted RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 PDE6CP51160 858 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 DEUP1Q05D60 604 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 IRF3Q14653 427 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 RASA2Q15283 850 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 BMT2Q1RMZ1 405 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 RILPL1Q5EBL4 403 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 ATPAF1Q5TC12 328 aaPredicted RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 SLC9A4Q6AI14 798 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 DGAT2L7PQ6IED9 249 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 MON1AQ86VX9 555 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 OR4N4Q8N0Y3 316 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 SDR16C5Q8N3Y7 309 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 FSTL5Q8N475 847 aaPredicted RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 TSPYL6Q8N831 410 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 CHST13Q8NET6 341 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 NPIPB3Q92617 1050 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 GFM2Q969S9 779 aaKnown RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 RNFT2Q96EX2 444 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 RBM15Q96T37 977 aaKnown RBP eCLIP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 HDHD5Q9BXW7 423 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 GLIS2Q9BZE0 524 aaPredicted RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 UNKLQ9H9P5 680 aaKnown RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 EIF2B3Q9NR50 452 aaKnown RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 CWC25Q9NXE8 425 aaPredicted RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 NKIRAS2Q9NYR9 191 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 C5AR2Q9P296 337 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 DNAJB11Q9UBS4 358 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 EIF2B4Q9UI10 523 aaKnown RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 ADAM20O43506 726 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 KAT7O95251 611 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 PFKLP17858 780 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 PTMSP20962 102 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 MCCP23508 829 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 CXCR5P32302 372 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 CLCN2P51788 898 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 MRPL49Q13405 166 aaKnown RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 BFSP2Q13515 415 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 TRIM71Q2Q1W2 868 aaKnown RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 METRNLQ641Q3 311 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 ARL6IP4Q66PJ3 421 aaKnown RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 KAZNQ674X7 775 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 MTFR2Q6P444 385 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 Q6ZUG5 572 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 ARMC8Q8IUR7 673 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 NAT8LQ8N9F0 302 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 SSH3Q8TE77 659 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 SLC7A6OSQ96CW6 309 aaPredicted RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 FAM227BQ96M60 508 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 HIST1H2AAQ96QV6 131 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 EYA3Q99504 573 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 C17orf80Q9BSJ5 609 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 TXLNGYQ9BZA5 131 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 ZNF552Q9H707 407 aaPredicted RBP1.81□□□□□ -2.12
BRCA1-202ENST00000354071 NEU2Q9Y3R4 380 aa1.81□□□□□ -2.12
BRCA1-202ENST00000354071 OR2W5A6NFC9 320 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 TGDSO95455 350 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 JUNP05412 331 aaKnown RBP1.8□□□□□ -2.12
BRCA1-202ENST00000354071 URODP06132 367 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 RPS6KB1P23443 525 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 TM4SF1P30408 202 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 UQCRC1P31930 480 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 VIPR2P41587 438 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 PTPN9P43378 593 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 JAG1P78504 1218 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 PPARDQ03181 441 aa1.8□□□□□ -2.12
BRCA1-202ENST00000354071 CUL4AQ13619 759 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms