RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 C1QBPQ07021 282 aaKnown RBP8.94□□□□□ -0.98
TRIM55-204ENST00000353317 CTC1Q2NKJ3 1217 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 HHATQ5VTY9 493 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 TRIM72Q6ZMU5 477 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 NLRP9Q7RTR0 991 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 APBB1IPQ7Z5R6 666 aaPredicted RBP8.94□□□□□ -0.98
TRIM55-204ENST00000353317 MTDHQ86UE4 582 aaKnown RBP8.94□□□□□ -0.98
TRIM55-204ENST00000353317 ZNF276Q8N554 614 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 LRRC52Q8N7C0 313 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 TTC8Q8TAM2 541 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 RBM41Q96IZ5 413 aaKnown RBP8.94□□□□□ -0.98
TRIM55-204ENST00000353317 PIWIL1Q96J94 861 aaKnown RBP8.94□□□□□ -0.98
TRIM55-204ENST00000353317 C12orf65Q9H3J6 166 aaKnown RBP8.94□□□□□ -0.98
TRIM55-204ENST00000353317 CYP3A43Q9HB55 503 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 PSMC3IPQ9P2W1 217 aaPredicted RBP8.94□□□□□ -0.98
TRIM55-204ENST00000353317 HCSTQ9UBK5 93 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 IP6K2Q9UHH9 426 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 CORO1CQ9ULV4 474 aaPredicted RBP8.94□□□□□ -0.98
TRIM55-204ENST00000353317 PCDHGC3Q9UN70 934 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 CLUHO75153 1309 aa8.94□□□□□ -0.98
TRIM55-204ENST00000353317 WDR91A4D1P6 747 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 C2CD2LO14523 706 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 LIN7AO14910 233 aaPredicted RBP8.93□□□□□ -0.98
TRIM55-204ENST00000353317 MICAL2O94851 1124 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 UPP2O95045 317 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 KRT1P04264 644 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 ADRA1DP25100 572 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 SSTR1P30872 391 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 CDH5P33151 784 aaPredicted RBP8.93□□□□□ -0.98
TRIM55-204ENST00000353317 CETN2P41208 172 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 RASSF2P50749 326 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 SLC45A4Q5BKX6 768 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 CLLU1OSQ5K130 101 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 SPOCD1Q6ZMY3 1216 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 CENPUQ71F23 418 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 LRRC8DQ7L1W4 858 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 TTC30AQ86WT1 665 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 ZNF280BQ86YH2 543 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 ENDOVQ8N8Q3 282 aaKnown RBP8.93□□□□□ -0.98
TRIM55-204ENST00000353317 DBF4BQ8NFT6 615 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 HASPINQ8TF76 798 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 MCEEQ96PE7 176 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 MIPEPQ99797 713 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 RGS18Q9NS28 235 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 GDAP2Q9NXN4 497 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 SAE1Q9UBE0 346 aaPredicted RBP8.93□□□□□ -0.98
TRIM55-204ENST00000353317 SLC24A2Q9UI40 661 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 RABGEF1Q9UJ41 708 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 ZFP69BQ9UJL9 534 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.93□□□□□ -0.98
TRIM55-204ENST00000353317 DRG1Q9Y295 367 aaKnown RBP8.93□□□□□ -0.98
TRIM55-204ENST00000353317 INPP5FQ9Y2H2 1132 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 TSC2P49815 1807 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 hCG_1818297A0A087WSY0 165 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 A6NHS1 94 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 SGK1O00141 431 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 LUC7L3O95232 432 aaKnown RBP8.93□□□□□ -0.98
TRIM55-204ENST00000353317 ERBB2P04626 1255 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 THP07101 528 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 ACAT1P24752 427 aaKnown RBP8.93□□□□□ -0.98
TRIM55-204ENST00000353317 GCKP35557 465 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 PTDSS1P48651 473 aaKnown RBP8.93□□□□□ -0.98
TRIM55-204ENST00000353317 GATMP50440 423 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 RABGGTBP53611 331 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 VCPP55072 806 aaKnown RBP8.93□□□□□ -0.98
TRIM55-204ENST00000353317 CCL23P55773 120 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 GEMIN4P57678 1058 aaKnown RBP8.93□□□□□ -0.98
TRIM55-204ENST00000353317 PLCB3Q01970 1234 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 FAAP100Q0VG06 881 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 OVGP1Q12889 678 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 MTM1Q13496 603 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 RASA2Q15283 850 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 UPP1Q16831 310 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 MSS51Q4VC12 460 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 EFHC2Q5JST6 749 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 WSCD1Q658N2 575 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 NAIF1Q69YI7 327 aaPredicted RBP8.93□□□□□ -0.98
TRIM55-204ENST00000353317 CLNKQ7Z7G1 428 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 OR6B3Q8NGW1 331 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 ZNF333Q96JL9 665 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 ANKRD27Q96NW4 1050 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 WDR83Q9BRX9 315 aaKnown RBP8.93□□□□□ -0.98
TRIM55-204ENST00000353317 CRISPLD2Q9H0B8 497 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 C10orf88Q9H8K7 445 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 RSAD1Q9HA92 442 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 KANSL3Q9P2N6 904 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 DCTN4Q9UJW0 460 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 SHOC2Q9UQ13 582 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 FARP1Q9Y4F1 1045 aaPredicted RBP8.93□□□□□ -0.98
TRIM55-204ENST00000353317 VWA8A3KMH1 1905 aa8.93□□□□□ -0.98
TRIM55-204ENST00000353317 E7ENQ6 273 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 DDHD2O94830 711 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 ITGAVP06756 1048 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 CCDC130P13994 396 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 SELPP16109 830 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 PTPN4P29074 926 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 TKTP29401 623 aaKnown RBP8.92□□□□□ -0.98
TRIM55-204ENST00000353317 CDKN2BP42772 138 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 TAF6P49848 677 aa8.92□□□□□ -0.98
TRIM55-204ENST00000353317 GDF10P55107 478 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms