RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 CDKL1Q00532 357 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 RELAQ04206 551 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 ART3Q13508 389 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 DPYSL3Q14195 570 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 FSCBQ5H9T9 825 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 ARMCX6Q7L4S7 300 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 ENOSF1Q7L5Y1 443 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 GPR141Q7Z602 305 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 LRRN4Q8WUT4 740 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 RSPH1Q8WYR4 309 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 CASP10Q92851 521 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 ATP2A3Q93084 1043 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 PGBD4Q96DM1 585 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 TMA16Q96EY4 203 aaKnown RBP7.88□□□□□ -1.15
BRCA1-201ENST00000352993 ZNF512Q96ME7 567 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-201ENST00000352993 RBM38Q9H0Z9 239 aaKnown RBP7.88□□□□□ -1.15
BRCA1-201ENST00000352993 TBCCD1Q9NVR7 557 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 KCND2Q9NZV8 630 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 ZNRF3Q9ULT6 936 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 H3BNX3 289 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 AP1G1O43747 822 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 COL6A2P12110 1019 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 CDKN2BP42772 138 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 HADHQ16836 314 aaKnown RBP7.88□□□□□ -1.15
BRCA1-201ENST00000352993 N4BP2L1Q5TBK1 243 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-201ENST00000352993 DRICH1Q6PGQ1 229 aaPredicted RBP7.88□□□□□ -1.15
BRCA1-201ENST00000352993 KBTBD6Q86V97 674 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 ABRAQ8N0Z2 381 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 GRIN3AQ8TCU5 1115 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 TFB1MQ8WVM0 346 aaKnown RBP7.88□□□□□ -1.15
BRCA1-201ENST00000352993 KMT5AQ9NQR1 393 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 DDX56Q9NY93 547 aaKnown RBP7.88□□□□□ -1.15
BRCA1-201ENST00000352993 RGL2O15211 777 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 HSPA4LO95757 839 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 HLA-DRAP01903 254 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 MCF2P10911 925 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 EIF2AK2P19525 551 aaKnown RBP7.88□□□□□ -1.15
BRCA1-201ENST00000352993 NFKBIAP25963 317 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 PHEXP78562 749 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 ADGRE1Q14246 886 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 PDCD4Q53EL6 469 aaKnown RBP7.88□□□□□ -1.15
BRCA1-201ENST00000352993 OGFOD2Q6N063 350 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 SNX32Q86XE0 403 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 ZNF677Q86XU0 584 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 MYO1HQ8N1T3 1032 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 VPS50Q96JG6 964 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 PKP2Q99959 881 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 RNPEPQ9H4A4 650 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 ZNF696Q9H7X3 374 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 PLK2Q9NYY3 685 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 ADA2Q9NZK5 511 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 SIRPGQ9P1W8 387 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 MYRFQ9Y2G1 1151 aa7.88□□□□□ -1.15
BRCA1-201ENST00000352993 CNTNAP2Q9UHC6 1331 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 HTR3EA5X5Y0 456 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 ZBTB11O95625 1053 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-201ENST00000352993 XRCC1P18887 633 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-201ENST00000352993 OSBPP22059 807 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 HMOX2P30519 316 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 IDH3AP50213 366 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 CDK9P50750 372 aaKnown RBP7.87□□□□□ -1.15
BRCA1-201ENST00000352993 SOX10P56693 466 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 RPL26P61254 145 aaKnown RBP7.87□□□□□ -1.15
BRCA1-201ENST00000352993 ROR1Q01973 937 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 GSTM4Q03013 218 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 DMP1Q13316 513 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-201ENST00000352993 BTG3Q14201 252 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-201ENST00000352993 ABCB5Q2M3G0 1257 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 ANGEL2Q5VTE6 544 aaKnown RBP7.87□□□□□ -1.15
BRCA1-201ENST00000352993 WDR78Q5VTH9 848 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 PLA2G4FQ68DD2 849 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 PLEKHA7Q6IQ23 1121 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 XKR5Q6UX68 686 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 NPNTQ6UXI9 565 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 BNC2Q6ZN30 1099 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-201ENST00000352993 Q6ZNX1 250 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 FAM156AQ8NDB6 213 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 SLC35B2Q8TB61 432 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 DCAF4Q8WV16 495 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 C17orf50Q8WW18 174 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 MKL1Q969V6 931 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 RMND5BQ96G75 393 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-201ENST00000352993 CDCA7Q9BWT1 371 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-201ENST00000352993 GCOM2Q9BZD3 368 aaPredicted RBP7.87□□□□□ -1.15
BRCA1-201ENST00000352993 TXNDC16Q9P2K2 825 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 EPS15L1Q9UBC2 864 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 SSX2IPQ9Y2D8 614 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 NAV1Q8NEY1 1877 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 ZNF536O15090 1300 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 IGLV3-22A0A075B6J6 115 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 MATN2O00339 956 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 SPTLC1O15269 473 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 CD48P09326 243 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 BAG6P46379 1132 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 HSPA13P48723 471 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 ACOT2P49753 483 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 GCNT1Q02742 428 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 PPP2R5DQ14738 602 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 TEX44Q53QW1 395 aa7.87□□□□□ -1.15
BRCA1-201ENST00000352993 PGM2L1Q6PCE3 622 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms