RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 IRF2BPLQ9H1B7 796 aa23.09■■□□□ 1.29
SNX3-202ENST00000349379 SFMBT1Q9UHJ3 866 aa23.09■■□□□ 1.29
SNX3-202ENST00000349379 CEP83Q9Y592 693 aa23.09■■□□□ 1.29
SNX3-202ENST00000349379 A0A1W2PQC6 194 aa23.08■■□□□ 1.29
SNX3-202ENST00000349379 EGFP01133 1207 aa23.08■■□□□ 1.29
SNX3-202ENST00000349379 IGLV3-27P01718 113 aa23.08■■□□□ 1.29
SNX3-202ENST00000349379 CORO1AP31146 461 aaKnown RBP23.08■■□□□ 1.29
SNX3-202ENST00000349379 STAT1P42224 750 aa23.08■■□□□ 1.29
SNX3-202ENST00000349379 FILIP1LQ4L180 1135 aa23.08■■□□□ 1.29
SNX3-202ENST00000349379 C12orf40Q86WS4 652 aa23.08■■□□□ 1.29
SNX3-202ENST00000349379 TMEM25Q86YD3 366 aa23.08■■□□□ 1.29
SNX3-202ENST00000349379 FAM217AQ8IXS0 508 aa23.08■■□□□ 1.29
SNX3-202ENST00000349379 TMEM35BQ8NCS4 154 aa23.08■■□□□ 1.29
SNX3-202ENST00000349379 GOLGA1Q92805 767 aa23.08■■□□□ 1.29
SNX3-202ENST00000349379 PRMT8Q9NR22 394 aaPredicted RBP23.08■■□□□ 1.29
SNX3-202ENST00000349379 SPATA6Q9NWH7 488 aaPredicted RBP23.08■■□□□ 1.29
SNX3-202ENST00000349379 ASNSD1Q9NWL6 643 aa23.08■■□□□ 1.29
SNX3-202ENST00000349379 H0Y858 1186 aa23.07■■□□□ 1.28
SNX3-202ENST00000349379 LSM8O95777 96 aaKnown RBP23.07■■□□□ 1.28
SNX3-202ENST00000349379 ERBB2P04626 1255 aa23.07■■□□□ 1.28
SNX3-202ENST00000349379 GLI1P08151 1106 aa23.07■■□□□ 1.28
SNX3-202ENST00000349379 HMBSP08397 361 aa23.07■■□□□ 1.28
SNX3-202ENST00000349379 MMEP08473 750 aa23.07■■□□□ 1.28
SNX3-202ENST00000349379 NHLH1Q02575 133 aa23.07■■□□□ 1.28
SNX3-202ENST00000349379 NR1I3Q14994 352 aa23.07■■□□□ 1.28
SNX3-202ENST00000349379 TAF3Q5VWG9 929 aa23.07■■□□□ 1.28
SNX3-202ENST00000349379 Q6ZS52 159 aa23.07■■□□□ 1.28
SNX3-202ENST00000349379 DQX1Q8TE96 717 aaKnown RBP23.07■■□□□ 1.28
SNX3-202ENST00000349379 FAM149B1Q96BN6 582 aa23.07■■□□□ 1.28
SNX3-202ENST00000349379 TRIM62Q9BVG3 475 aa23.07■■□□□ 1.28
SNX3-202ENST00000349379 AGO1Q9UL18 857 aaKnown RBP23.07■■□□□ 1.28
SNX3-202ENST00000349379 NAALADL1Q9UQQ1 740 aa23.07■■□□□ 1.28
SNX3-202ENST00000349379 MSI1O43347 362 aaKnown RBP23.06■■□□□ 1.28
SNX3-202ENST00000349379 NCAM1P13591 858 aa23.06■■□□□ 1.28
SNX3-202ENST00000349379 CHRNB2P17787 502 aa23.06■■□□□ 1.28
SNX3-202ENST00000349379 GABRB2P47870 512 aa23.06■■□□□ 1.28
SNX3-202ENST00000349379 NOMO3P69849 1222 aa23.06■■□□□ 1.28
SNX3-202ENST00000349379 FMO1Q01740 532 aa23.06■■□□□ 1.28
SNX3-202ENST00000349379 CDR2Q01850 454 aa23.06■■□□□ 1.28
SNX3-202ENST00000349379 NNTQ13423 1086 aa23.06■■□□□ 1.28
SNX3-202ENST00000349379 FBXO43Q4G163 708 aa23.06■■□□□ 1.28
SNX3-202ENST00000349379 OLFML1Q6UWY5 402 aa23.06■■□□□ 1.28
SNX3-202ENST00000349379 FAM183BPQ6ZVS7 135 aa23.06■■□□□ 1.28
SNX3-202ENST00000349379 PHTF2Q8N3S3 785 aa23.06■■□□□ 1.28
SNX3-202ENST00000349379 CPXM2Q8N436 756 aa23.06■■□□□ 1.28
SNX3-202ENST00000349379 SPEM1Q8N4L4 309 aa23.06■■□□□ 1.28
SNX3-202ENST00000349379 SLC20A1Q8WUM9 679 aa23.06■■□□□ 1.28
SNX3-202ENST00000349379 P2RY11Q96G91 374 aa23.06■■□□□ 1.28
SNX3-202ENST00000349379 POPDC2Q9HBU9 364 aa23.06■■□□□ 1.28
SNX3-202ENST00000349379 STOML2Q9UJZ1 356 aa23.06■■□□□ 1.28
SNX3-202ENST00000349379 FBXO4Q9UKT5 387 aa23.06■■□□□ 1.28
SNX3-202ENST00000349379 A0A0A0MRY4 1105 aa23.05■■□□□ 1.28
SNX3-202ENST00000349379 LAMTOR5O43504 91 aa23.05■■□□□ 1.28
SNX3-202ENST00000349379 LATS1O95835 1130 aa23.05■■□□□ 1.28
SNX3-202ENST00000349379 IGLV3-25P01717 112 aa23.05■■□□□ 1.28
SNX3-202ENST00000349379 SLC6A11P48066 632 aa23.05■■□□□ 1.28
SNX3-202ENST00000349379 YWHAZP63104 245 aaKnown RBP23.05■■□□□ 1.28
SNX3-202ENST00000349379 TPM4P67936 248 aa23.05■■□□□ 1.28
SNX3-202ENST00000349379 FANCCQ00597 558 aa23.05■■□□□ 1.28
SNX3-202ENST00000349379 RING1Q06587 406 aa23.05■■□□□ 1.28
SNX3-202ENST00000349379 MESP2Q0VG99 397 aa23.05■■□□□ 1.28
SNX3-202ENST00000349379 SYPL2Q5VXT5 272 aa23.05■■□□□ 1.28
SNX3-202ENST00000349379 DENND1CQ8IV53 801 aa23.05■■□□□ 1.28
SNX3-202ENST00000349379 ZNF397Q8NF99 534 aaPredicted RBP23.05■■□□□ 1.28
SNX3-202ENST00000349379 IPO4Q8TEX9 1081 aaKnown RBP23.05■■□□□ 1.28
SNX3-202ENST00000349379 BAP1Q92560 729 aa23.05■■□□□ 1.28
SNX3-202ENST00000349379 SLC2A13Q96QE2 648 aa23.05■■□□□ 1.28
SNX3-202ENST00000349379 PDCL3Q9H2J4 239 aa23.05■■□□□ 1.28
SNX3-202ENST00000349379 MYO6Q9UM54 1294 aa23.05■■□□□ 1.28
SNX3-202ENST00000349379 GFRA2O00451 464 aa23.04■■□□□ 1.28
SNX3-202ENST00000349379 CACNG3O60359 315 aa23.04■■□□□ 1.28
SNX3-202ENST00000349379 PAPSS2O95340 614 aaPredicted RBP23.04■■□□□ 1.28
SNX3-202ENST00000349379 SERPINC1P01008 464 aa23.04■■□□□ 1.28
SNX3-202ENST00000349379 CYP1A1P04798 512 aaPredicted RBP23.04■■□□□ 1.28
SNX3-202ENST00000349379 CHRM1P11229 460 aaPredicted RBP23.04■■□□□ 1.28
SNX3-202ENST00000349379 CHKAP35790 457 aa23.04■■□□□ 1.28
SNX3-202ENST00000349379 SNX16P57768 344 aa23.04■■□□□ 1.28
SNX3-202ENST00000349379 EIF4EBP2Q13542 120 aaPredicted RBP23.04■■□□□ 1.28
SNX3-202ENST00000349379 TAF5Q15542 800 aa23.04■■□□□ 1.28
SNX3-202ENST00000349379 SLC26A9Q7LBE3 791 aa23.04■■□□□ 1.28
SNX3-202ENST00000349379 ZDHHC17Q8IUH5 632 aa23.04■■□□□ 1.28
SNX3-202ENST00000349379 SLC39A13Q96H72 371 aa23.04■■□□□ 1.28
SNX3-202ENST00000349379 SERPINB11Q96P15 392 aa23.04■■□□□ 1.28
SNX3-202ENST00000349379 PNKPQ96T60 521 aa23.04■■□□□ 1.28
SNX3-202ENST00000349379 TTYH3Q9C0H2 523 aa23.04■■□□□ 1.28
SNX3-202ENST00000349379 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.03■■□□□ 1.28
SNX3-202ENST00000349379 CHURC1-FNTBB4DL54 471 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 GOLGA6L19H0YKK7 550 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 K7EQS6 105 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 HSF2BPO75031 334 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 RNF40O75150 1001 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 TULP3O75386 442 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 PENKP01210 267 aaPredicted RBP23.03■■□□□ 1.28
SNX3-202ENST00000349379 SP9P0CG40 484 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 TDGF1P13385 188 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 SCNN1AP37088 669 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 PBX1P40424 430 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 HARS2P49590 506 aaKnown RBP23.03■■□□□ 1.28
SNX3-202ENST00000349379 CCR3P51677 355 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 SLC6A3Q01959 620 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms