RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 IGLV3-22A0A075B6J6 115 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 E9PBE3 544 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 KLHL41O60662 606 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 ATICP31939 592 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 RAB27AP51159 221 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 ACAP1Q15027 740 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 HABP4Q5JVS0 413 aaKnown RBP15.2■□□□□ 0.02
NUP50-201ENST00000347635 FAM13CQ8NE31 585 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 GDPD5Q8WTR4 605 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 COLEC11Q9BWP8 271 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 FAM192AQ9GZU8 254 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 SIK2Q9H0K1 926 aa15.2■□□□□ 0.02
NUP50-201ENST00000347635 ZNF541Q9H0D2 1346 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 ZC3H4Q9UPT8 1303 aaKnown RBP15.19■□□□□ 0.02
NUP50-201ENST00000347635 UNCXA6NJT0 531 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 CHADO15335 359 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 CHRNB2P17787 502 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 RPL7AP62424 266 aaKnown RBP15.19■□□□□ 0.02
NUP50-201ENST00000347635 TMEM62Q0P6H9 643 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 UGCGQ16739 394 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 ZPBP2Q6X784 338 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 MYLK4Q86YV6 388 aaPredicted RBP15.19■□□□□ 0.02
NUP50-201ENST00000347635 IL31RAQ8NI17 732 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 AP4E1Q9UPM8 1137 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 MYH8P13535 1937 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 MROH7Q68CQ1 1323 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 TRPC5OSA6NMA1 111 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 SPDYE16A6NNV3 312 aaPredicted RBP15.19■□□□□ 0.02
NUP50-201ENST00000347635 MICAL2O94851 1124 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 LAMTOR4Q0VGL1 99 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 STKLD1Q8NE28 680 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 SIGLEC16A6NMB1 481 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 ANGPT2O15123 496 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 SEC24DO94855 1032 aaPredicted RBP15.19■□□□□ 0.02
NUP50-201ENST00000347635 ZBTB48P10074 688 aaPredicted RBP15.19■□□□□ 0.02
NUP50-201ENST00000347635 HSD17B4P51659 736 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 PRAMEP78395 509 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 PDAP1Q13442 181 aaKnown RBP15.19■□□□□ 0.02
NUP50-201ENST00000347635 SEPT8Q92599 483 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 STARD7Q9NQZ5 370 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 LYPLA2O95372 231 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 HNRNPCP07910 306 aaKnown RBP eCLIP15.19■□□□□ 0.02
NUP50-201ENST00000347635 CXCL8P10145 99 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 PPARGP37231 505 aaPredicted RBP15.19■□□□□ 0.02
NUP50-201ENST00000347635 CLCN3P51790 818 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 BTKQ06187 659 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 GRIK4Q16099 956 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 ZACNQ401N2 412 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 WLSQ5T9L3 541 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 CXorf38Q8TB03 319 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 USP33Q8TEY7 942 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 DDI1Q8WTU0 396 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 IFT43Q96FT9 208 aa15.19■□□□□ 0.02
NUP50-201ENST00000347635 KCNA4P22459 653 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 DEFB115Q30KQ5 88 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 ZCCHC23Q6ZST2 131 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 ACOT1Q86TX2 421 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 TLK2Q86UE8 772 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 TIAM2Q8IVF5 1701 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 ZNF317Q96PQ6 595 aaPredicted RBP15.18■□□□□ 0.02
NUP50-201ENST00000347635 TINF2Q9BSI4 451 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 ARHGEF38Q9NXL2 777 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 DPYSL4O14531 572 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 MTSS1O43312 755 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 INSRRP14616 1297 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 NSUN2Q08J23 767 aaKnown RBP eCLIP15.18■□□□□ 0.02
NUP50-201ENST00000347635 LY6KQ17RY6 165 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 LLGL2Q6P1M3 1020 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 TDRD5Q8NAT2 981 aaKnown RBP15.18■□□□□ 0.02
NUP50-201ENST00000347635 OR6P1Q8NGX9 317 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 TBCBQ99426 244 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 FNDC3AQ9Y2H6 1198 aaKnown RBP15.18■□□□□ 0.02
NUP50-201ENST00000347635 C2CD2Q9Y426 696 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 RGPD5Q99666 1765 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 TIMM44O43615 452 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 LAMB3Q13751 1172 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 POLNQ7Z5Q5 900 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 ZC3H3Q8IXZ2 948 aaKnown RBP15.18■□□□□ 0.02
NUP50-201ENST00000347635 SLC7A14Q8TBB6 771 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 LRRC40Q9H9A6 602 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 WARS2Q9UGM6 360 aaKnown RBP15.18■□□□□ 0.02
NUP50-201ENST00000347635 PTP4A2Q12974 167 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 PCBP1Q15365 356 aaKnown RBP eCLIP15.18■□□□□ 0.02
NUP50-201ENST00000347635 SEL1L3Q68CR1 1132 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 NAPEPLDQ6IQ20 393 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 KDELC2Q7Z4H8 507 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 NLGN2Q8NFZ4 835 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 UPF1Q92900 1129 aaKnown RBP eCLIP15.18■□□□□ 0.02
NUP50-201ENST00000347635 TSPAN17Q96FV3 270 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 PORCNQ9H237 461 aa15.18■□□□□ 0.02
NUP50-201ENST00000347635 MYH2Q9UKX2 1941 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 WDR27A2RRH5 827 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 AHCYL1O43865 530 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 SNX2O60749 519 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 GNL1P36915 607 aaPredicted RBP15.17■□□□□ 0.02
NUP50-201ENST00000347635 CNTN2Q02246 1040 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 MGAT5Q09328 741 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 KYAT3Q6YP21 454 aaKnown RBP15.17■□□□□ 0.02
NUP50-201ENST00000347635 STRA8Q7Z7C7 330 aa15.17■□□□□ 0.02
NUP50-201ENST00000347635 NT5DC4Q86YG4 428 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms