RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 FEZ2Q9UHY8 353 aaPredicted RBP11.43□□□□□ -0.58
ECM1-201ENST00000346569 ZMYND8Q9ULU4 1186 aaPredicted RBP11.43□□□□□ -0.58
ECM1-201ENST00000346569 AP4E1Q9UPM8 1137 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 NEU2Q9Y3R4 380 aa11.43□□□□□ -0.58
ECM1-201ENST00000346569 TRIOBPQ9H2D6 2365 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 A0A1W2PQH9 124 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 ZSCAN5CA6NGD5 496 aaPredicted RBP11.42□□□□□ -0.58
ECM1-201ENST00000346569 CST8O60676 142 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 MYBL2P10244 700 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 CTSAP10619 480 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 ATP2A2P16615 1042 aaKnown RBP11.42□□□□□ -0.58
ECM1-201ENST00000346569 ATF6P18850 670 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 CARSP49589 748 aaKnown RBP11.42□□□□□ -0.58
ECM1-201ENST00000346569 AIF1P55008 147 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 DR1Q01658 176 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 GUCY2DQ02846 1103 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 SCAPQ12770 1279 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 MTMR3Q13615 1198 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 ANKRD20A8PQ5CZ79 823 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 BEND6Q5SZJ8 279 aaPredicted RBP11.42□□□□□ -0.58
ECM1-201ENST00000346569 BTBD8Q5XKL5 378 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 SLC9A4Q6AI14 798 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 MSANTD2Q6P1R3 559 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 JAMLQ86YT9 394 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 IFT20Q8IY31 132 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 CCDC105Q8IYK2 499 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 PYROXD2Q8N2H3 581 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 ZNF276Q8N554 614 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 PQLC3Q8N755 202 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 KLHL23Q8NBE8 558 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 TTC13Q8NBP0 860 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 STKLD1Q8NE28 680 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 PCDH19Q8TAB3 1148 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 SLC35B2Q8TB61 432 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 GPR152Q8TDT2 470 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 CASKIN2Q8WXE0 1202 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 ATG4AQ8WYN0 398 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 KCTD15Q96SI1 283 aaPredicted RBP11.42□□□□□ -0.58
ECM1-201ENST00000346569 ZNF670Q9BS34 389 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 FRMD8P1Q9BZ68 369 aaPredicted RBP11.42□□□□□ -0.58
ECM1-201ENST00000346569 PLEKHA4Q9H4M7 779 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 ANLNQ9NQW6 1124 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.42□□□□□ -0.586e-6■■□□□ 13.7
ECM1-201ENST00000346569 TMEM51Q9NW97 253 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 DDIT4Q9NX09 232 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 CLIC5Q9NZA1 410 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.42□□□□□ -0.58
ECM1-201ENST00000346569 MAFFQ9ULX9 164 aa11.42□□□□□ -0.58
ECM1-201ENST00000346569 COLQQ9Y215 455 aaPredicted RBP11.42□□□□□ -0.58
ECM1-201ENST00000346569 LCHNA4D1U4 455 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 SLC38A8A6NNN8 435 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 APOC4-APOC2K7ER74 178 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 LIASO43766 372 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 TLL1O43897 1013 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 APOC2P02655 101 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 URODP06132 367 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 GBP1P32455 592 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 TAF10Q12962 218 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 SEMA3BQ13214 749 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 NME3Q13232 169 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 SNX1Q13596 522 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 TFDP2Q14188 446 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 OASLQ15646 514 aaKnown RBP11.41□□□□□ -0.58
ECM1-201ENST00000346569 LILRA6Q6PI73 481 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 TAC4Q86UU9 113 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 TCEAL8Q8IYN2 117 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 ARHGAP18Q8N392 663 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 PLD5Q8N7P1 536 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 PATJQ8NI35 1801 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 ADAM32Q8TC27 787 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 GIPC2Q8TF65 315 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 AUTS2Q8WXX7 1259 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 DPF3Q92784 378 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 CASP10Q92851 521 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 NKD2Q969F2 451 aaPredicted RBP11.41□□□□□ -0.58
ECM1-201ENST00000346569 SEPT5Q99719 369 aaPredicted RBP11.41□□□□□ -0.58
ECM1-201ENST00000346569 CALN1Q9BXU9 219 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 MAK16Q9BXY0 300 aaKnown RBP11.41□□□□□ -0.58
ECM1-201ENST00000346569 UBE2OQ9C0C9 1292 aaKnown RBP11.41□□□□□ -0.58
ECM1-201ENST00000346569 DHX35Q9H5Z1 703 aaKnown RBP11.41□□□□□ -0.58
ECM1-201ENST00000346569 WDCPQ9H6R7 721 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 PRDM16Q9HAZ2 1276 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 TMPRSS4Q9NRS4 437 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 MRPL17Q9NRX2 175 aaKnown RBP11.41□□□□□ -0.58
ECM1-201ENST00000346569 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.41□□□□□ -0.58
ECM1-201ENST00000346569 ARGLU1Q9NWB6 273 aaPredicted RBP11.41□□□□□ -0.58
ECM1-201ENST00000346569 CWC15Q9P013 229 aaKnown RBP11.41□□□□□ -0.58
ECM1-201ENST00000346569 GMIPQ9P107 970 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 RCOR3Q9P2K3 495 aaPredicted RBP11.41□□□□□ -0.58
ECM1-201ENST00000346569 DNPEPQ9ULA0 475 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 LZTS1Q9Y250 596 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 SSX2IPQ9Y2D8 614 aa11.41□□□□□ -0.58
ECM1-201ENST00000346569 SYNJ2BP-COX16A0A087WUM0 186 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 TEX28O15482 410 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 IRAK2O43187 625 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 CXCL14O95715 111 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 HMGA1P17096 107 aaKnown RBP11.4□□□□□ -0.58
ECM1-201ENST00000346569 IVDP26440 423 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 HCAR3P49019 387 aa11.4□□□□□ -0.58
ECM1-201ENST00000346569 PSEN1P49768 467 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms