RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 USP3Q9Y6I4 520 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 TSC2P49815 1807 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 HHLA1C9JL84 531 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 E7ESA3 106 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 F8W810 466 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 FAM107AO95990 144 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 INHAP05111 366 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 USP17L7P0C7H9 530 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 CREB1P16220 341 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 AMPD1P23109 780 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 YY1P25490 414 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 ARL4AP40617 200 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 NR2C2P49116 596 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 DEUP1Q05D60 604 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 SYCP2LQ5T4T6 812 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 FAM171BQ6P995 826 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 CTU1Q7Z7A3 348 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 PDIK1LQ8N165 341 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 UROC1Q96N76 676 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 XPO6Q96QU8 1125 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 FAM107BQ9H098 131 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 CSNK1G1Q9HCP0 422 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 RAB6BQ9NRW1 208 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 RGS18Q9NS28 235 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 PIGVQ9NUD9 493 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 ETNK2Q9NVF9 386 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 EURLQ9NYK6 297 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 DSEQ9UL01 958 aa14.65□□□□□ -0.06
CDK5RAP1-202ENST00000346416 A0A1W2PQ45 241 aaPredicted RBP14.64□□□□□ -0.07
CDK5RAP1-202ENST00000346416 A0A1W2PQY0 241 aa14.64□□□□□ -0.07
CDK5RAP1-202ENST00000346416 GPX6P59796 221 aa14.64□□□□□ -0.07
CDK5RAP1-202ENST00000346416 KCNJ11Q14654 390 aa14.64□□□□□ -0.07
CDK5RAP1-202ENST00000346416 INTS6LQ5JSJ4 861 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP1-202ENST00000346416 NCBP2-AS2Q69YL0 99 aa14.64□□□□□ -0.07
CDK5RAP1-202ENST00000346416 OVOS1Q6IE37 1185 aa14.64□□□□□ -0.07
CDK5RAP1-202ENST00000346416 CDKL3Q8IVW4 592 aaPredicted RBP14.64□□□□□ -0.07
CDK5RAP1-202ENST00000346416 CCDC33Q8N5R6 958 aa14.64□□□□□ -0.07
CDK5RAP1-202ENST00000346416 SLC7A14Q8TBB6 771 aa14.64□□□□□ -0.07
CDK5RAP1-202ENST00000346416 ADAM32Q8TC27 787 aa14.64□□□□□ -0.07
CDK5RAP1-202ENST00000346416 ATXN2LQ8WWM7 1075 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP1-202ENST00000346416 WDR83Q9BRX9 315 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP1-202ENST00000346416 TSEN34Q9BSV6 310 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP1-202ENST00000346416 INTS9Q9NV88 658 aaKnown RBP14.64□□□□□ -0.07
CDK5RAP1-202ENST00000346416 DTLQ9NZJ0 730 aa14.64□□□□□ -0.07
CDK5RAP1-202ENST00000346416 RCOR3Q9P2K3 495 aaPredicted RBP14.64□□□□□ -0.07
CDK5RAP1-202ENST00000346416 CLUHO75153 1309 aa14.64□□□□□ -0.07
CDK5RAP1-202ENST00000346416 C9IYK1 514 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 NCAM1P13591 858 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 BDNFP23560 247 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 GCAP28676 217 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 RNASELQ05823 741 aaKnown RBP14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 XRCC4Q13426 336 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 BBS9Q3SYG4 887 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 SLC45A4Q5BKX6 768 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 DCLRE1AQ6PJP8 1040 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 KCNT2Q6UVM3 1135 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 SLC24A5Q71RS6 500 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 OR10T2Q8NGX3 314 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 ZNF473Q8WTR7 871 aaKnown RBP14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 STARD7Q9NQZ5 370 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 ARHGEF4Q9NR80 690 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 TMLHEQ9NVH6 421 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 ZMYND8Q9ULU4 1186 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 MFHAS1Q9Y4C4 1052 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 POC1B-GALNT4F8VUJ3 575 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 EBAG9O00559 213 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 CHADO15335 359 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 INPPL1O15357 1258 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 LTFP02788 710 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 PAX3P23760 479 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 SSTR1P30872 391 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 GLB1LQ6UWU2 654 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 LRRTM3Q86VH5 581 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 RIBC1Q8N443 379 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 ATP11CQ8NB49 1132 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 FBXO36Q8NEA4 188 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 CCDC110Q8TBZ0 833 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 RNF139Q8WU17 664 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 SUSD3Q96L08 255 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 TMEM209Q96SK2 561 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 PKMYT1Q99640 499 aa14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 HMX1Q9NP08 348 aaPredicted RBP14.63□□□□□ -0.07
CDK5RAP1-202ENST00000346416 TMEM120BA0PK00 339 aa14.62□□□□□ -0.07
CDK5RAP1-202ENST00000346416 B4GALT3O60512 393 aa14.62□□□□□ -0.07
CDK5RAP1-202ENST00000346416 EOMESO95936 686 aa14.62□□□□□ -0.07
CDK5RAP1-202ENST00000346416 TMED2Q15363 201 aa14.62□□□□□ -0.07
CDK5RAP1-202ENST00000346416 EFHC2Q5JST6 749 aa14.62□□□□□ -0.07
CDK5RAP1-202ENST00000346416 FAXCQ5TGI0 409 aa14.62□□□□□ -0.07
CDK5RAP1-202ENST00000346416 VSTM1Q6UX27 236 aa14.62□□□□□ -0.07
CDK5RAP1-202ENST00000346416 C3orf62Q6ZUJ4 267 aa14.62□□□□□ -0.07
CDK5RAP1-202ENST00000346416 BHLHA9Q7RTU4 235 aa14.62□□□□□ -0.07
CDK5RAP1-202ENST00000346416 ZNF280BQ86YH2 543 aa14.62□□□□□ -0.07
CDK5RAP1-202ENST00000346416 TDRPQ86YL5 185 aa14.62□□□□□ -0.07
CDK5RAP1-202ENST00000346416 SRRM1Q8IYB3 904 aaKnown RBP14.62□□□□□ -0.07
CDK5RAP1-202ENST00000346416 SLC43A3Q8NBI5 491 aa14.62□□□□□ -0.07
CDK5RAP1-202ENST00000346416 LINC01599Q8WXQ3 324 aa14.62□□□□□ -0.07
CDK5RAP1-202ENST00000346416 MAML1Q92585 1016 aa14.62□□□□□ -0.07
CDK5RAP1-202ENST00000346416 SLC9A7Q96T83 725 aa14.62□□□□□ -0.07
CDK5RAP1-202ENST00000346416 WDR6Q9NNW5 1121 aaKnown RBP14.62□□□□□ -0.07
CDK5RAP1-202ENST00000346416 H3BRJ5 948 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms