RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 NCBP2-AS2Q69YL0 99 aa16.01■□□□□ 0.15
UPF3B-202ENST00000345865 PPM1NQ8N819 430 aa16.01■□□□□ 0.15
UPF3B-202ENST00000345865 VPS11Q9H270 941 aa16.01■□□□□ 0.15
UPF3B-202ENST00000345865 NPHS2Q9NP85 383 aa16.01■□□□□ 0.15
UPF3B-202ENST00000345865 DTLQ9NZJ0 730 aa16.01■□□□□ 0.15
UPF3B-202ENST00000345865 SCN4AP35499 1836 aa16.01■□□□□ 0.15
UPF3B-202ENST00000345865 GCATO75600 419 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 SPAG6O75602 509 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 BEST1O76090 585 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 T-ENOLP0DO92 83 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 CDC42EP1Q00587 391 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 OTUD1Q5VV17 481 aaPredicted RBP16■□□□□ 0.15
UPF3B-202ENST00000345865 ARCQ7LC44 396 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 SLC26A11Q86WA9 606 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 FAM131BQ86XD5 332 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 CTAGE3PQ8IX95 158 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 RFWD2Q8NHY2 731 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 UTP4Q969X6 686 aaKnown RBP16■□□□□ 0.15
UPF3B-202ENST00000345865 SIGLEC10Q96LC7 697 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 FAM111AQ96PZ2 611 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 LRRC37BQ96QE4 947 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 MANSC1Q9H8J5 431 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 IKBKGQ9Y6K9 419 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 CLDN5O00501 218 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 CD4P01730 458 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 ALADP13716 330 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 KCNE1P15382 129 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 VAV1P15498 845 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 PRKCHP24723 683 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 TARSP26639 723 aaKnown RBP16■□□□□ 0.15
UPF3B-202ENST00000345865 SKIV2L2P42285 1042 aaKnown RBP16■□□□□ 0.15
UPF3B-202ENST00000345865 SNX16P57768 344 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 LILRA4P59901 499 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 RIPK1Q13546 671 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 SEPT7Q16181 437 aaKnown RBP16■□□□□ 0.15
UPF3B-202ENST00000345865 TRMT10BQ6PF06 316 aaKnown RBP16■□□□□ 0.15
UPF3B-202ENST00000345865 UNC5AQ6ZN44 842 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 TLK2Q86UE8 772 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 PIGZQ86VD9 579 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 LRRC6Q86X45 466 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 SMG8Q8ND04 991 aaKnown RBP16■□□□□ 0.15
UPF3B-202ENST00000345865 APPL2Q8NEU8 664 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 MAGEC3Q8TD91 643 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 APOPT1Q96IL0 206 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 TMEM237Q96Q45 408 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 SNX25Q9H3E2 840 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 CACNG4Q9UBN1 327 aa16■□□□□ 0.15
UPF3B-202ENST00000345865 DCAF8L1A6NGE4 600 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 UNCXA6NJT0 531 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 TRIM49D1C9J1S8 452 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 F5H423 210 aaPredicted RBP15.99■□□□□ 0.15
UPF3B-202ENST00000345865 ZNF865P0CJ78 1059 aaPredicted RBP15.99■□□□□ 0.15
UPF3B-202ENST00000345865 E2F5Q15329 346 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 CEP57Q86XR8 500 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 CDKL3Q8IVW4 592 aaPredicted RBP15.99■□□□□ 0.15
UPF3B-202ENST00000345865 DEFB106AQ8N104 65 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 MCUQ8NE86 351 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 PARK7Q99497 189 aaKnown RBP15.99■□□□□ 0.15
UPF3B-202ENST00000345865 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.99■□□□□ 0.15
UPF3B-202ENST00000345865 CPA4Q9UI42 421 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 STK38LQ9Y2H1 464 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 IPPQ9Y573 584 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 CSH1P0DML2 217 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 CSH2P0DML3 217 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 ACAT1P24752 427 aaKnown RBP15.99■□□□□ 0.15
UPF3B-202ENST00000345865 SCNN1AP37088 669 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 NDUFV1P49821 464 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 TAF6P49848 677 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 BEX3Q00994 111 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 ADIGQ0VDE8 80 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 PCBP1Q15365 356 aaKnown RBP eCLIP15.99■□□□□ 0.15
UPF3B-202ENST00000345865 SPRYD7Q5W111 196 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 PAQR9Q6ZVX9 377 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 ADGRF2Q8IZF7 708 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 VPS52Q8N1B4 723 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 B3GALNT2Q8NCR0 500 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 TBC1D31Q96DN5 1066 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 HSFY1Q96LI6 401 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 QKIQ96PU8 341 aaKnown RBP eCLIP15.99■□□□□ 0.15
UPF3B-202ENST00000345865 LGMNQ99538 433 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 NCAPGQ9BPX3 1015 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 FRMD8Q9BZ67 464 aaPredicted RBP15.99■□□□□ 0.15
UPF3B-202ENST00000345865 HAO1Q9UJM8 370 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 DCTN4Q9UJW0 460 aa15.99■□□□□ 0.15
UPF3B-202ENST00000345865 HMX2A2RU54 273 aa15.98■□□□□ 0.15
UPF3B-202ENST00000345865 HAS3O00219 553 aa15.98■□□□□ 0.15
UPF3B-202ENST00000345865 APOEP02649 317 aa15.98■□□□□ 0.15
UPF3B-202ENST00000345865 DESP17661 470 aa15.98■□□□□ 0.15
UPF3B-202ENST00000345865 AXLP30530 894 aa15.98■□□□□ 0.15
UPF3B-202ENST00000345865 MATKP42679 507 aa15.98■□□□□ 0.15
UPF3B-202ENST00000345865 PSEN2P49810 448 aa15.98■□□□□ 0.15
UPF3B-202ENST00000345865 RABGGTBP53611 331 aa15.98■□□□□ 0.15
UPF3B-202ENST00000345865 SETDB1Q15047 1291 aa15.98■□□□□ 0.15
UPF3B-202ENST00000345865 CCL14Q16627 93 aa15.98■□□□□ 0.15
UPF3B-202ENST00000345865 TTC39BQ5VTQ0 682 aaPredicted RBP15.98■□□□□ 0.15
UPF3B-202ENST00000345865 NLRP9Q7RTR0 991 aa15.98■□□□□ 0.15
UPF3B-202ENST00000345865 ZFP42Q96MM3 310 aa15.98■□□□□ 0.15
UPF3B-202ENST00000345865 ZNF560Q96MR9 790 aa15.98■□□□□ 0.15
UPF3B-202ENST00000345865 OLFM3Q96PB7 478 aa15.98■□□□□ 0.15
UPF3B-202ENST00000345865 FZD10Q9ULW2 581 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms