RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 THSD4Q6ZMP0 1018 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 MMS22LQ6ZRQ5 1243 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 FAM183BPQ6ZVS7 135 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 SLC26A9Q7LBE3 791 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 MIB1Q86YT6 1006 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 SLC30A5Q8TAD4 765 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 CLEC4CQ8WTT0 213 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 RSAD2Q8WXG1 361 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 EDEM1Q92611 657 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 PCDHB18PQ96TA0 734 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 SMG9Q9H0W8 520 aaKnown RBP12.37□□□□□ -0.43
SNCA-202ENST00000345009 OSER1Q9NX31 292 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 CFAP97Q9P2B7 532 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 ADAMTS1Q9UHI8 967 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 RASAL2Q9UJF2 1139 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 STAP1Q9ULZ2 295 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 ZNF510Q9Y2H8 683 aa12.37□□□□□ -0.43
SNCA-202ENST00000345009 HBS1LQ9Y450 684 aaKnown RBP12.37□□□□□ -0.43
SNCA-202ENST00000345009 SSU72P8A0A1W2PR75 194 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 SLC12A8A0AV02 714 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 TMCO5BA8MYB1 307 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 LEFTY2O00292 366 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 DCXO43602 365 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 RTN2O75298 545 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 FTLP02792 175 aaPredicted RBP12.36□□□□□ -0.43
SNCA-202ENST00000345009 MYBL1P10243 752 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 FCARP24071 287 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 GDI1P31150 447 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 IFNAR2P48551 515 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 HARS2P49590 506 aaKnown RBP12.36□□□□□ -0.43
SNCA-202ENST00000345009 PGFP49763 221 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 RNASE9P60153 205 aaKnown RBP12.36□□□□□ -0.43
SNCA-202ENST00000345009 AMPD2Q01433 879 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 NR1H3Q13133 447 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 MTF1Q14872 753 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 DCAF6Q58WW2 860 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 HGSNATQ68CP4 663 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 MSANTD2Q6P1R3 559 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 OLFML1Q6UWY5 402 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 VITQ6UXI7 678 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 ARCQ7LC44 396 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 XYLT1Q86Y38 959 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 UNC45BQ8IWX7 931 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 CSGALNACT1Q8TDX6 532 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 EXOC4Q96A65 974 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 OTUB2Q96DC9 234 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 SERPINB11Q96P15 392 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 PANX2Q96RD6 677 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 C11orf70Q9BRQ4 267 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 SYT11Q9BT88 431 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 RPP25Q9BUL9 199 aaKnown RBP12.36□□□□□ -0.43
SNCA-202ENST00000345009 KLF16Q9BXK1 252 aaPredicted RBP12.36□□□□□ -0.43
SNCA-202ENST00000345009 GRPEL1Q9HAV7 217 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 SLC2A4RGQ9NR83 387 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 DUS2Q9NX74 493 aaKnown RBP12.36□□□□□ -0.43
SNCA-202ENST00000345009 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.36□□□□□ -0.43
SNCA-202ENST00000345009 SLC12A6Q9UHW9 1150 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 MUTYHQ9UIF7 546 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 NUDT5Q9UKK9 219 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 FBXL21Q9UKT6 434 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 CCL26Q9Y258 94 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 PAXBP1Q9Y5B6 917 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 PATJQ8NI35 1801 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 TRIOO75962 3097 aa12.36□□□□□ -0.43
SNCA-202ENST00000345009 GOLGA8SH3BPF8 625 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 TNFRSF10AO00220 468 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 F9P00740 461 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 SLC2A3P11169 496 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 KRT3P12035 628 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 NOS2P35228 1153 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 EIF4A3P38919 411 aaKnown RBP12.35□□□□□ -0.43
SNCA-202ENST00000345009 MATKP42679 507 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 MTA1Q13330 715 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 NNTQ13423 1086 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 GRM2Q14416 872 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 ZNF77Q15935 545 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 E4F1Q66K89 784 aaPredicted RBP12.35□□□□□ -0.43
SNCA-202ENST00000345009 NUGGCQ68CJ6 796 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 DCUN1D2Q6PH85 259 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 C1orf228Q6PIY5 440 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 HFE2Q6ZVN8 426 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 SND1Q7KZF4 910 aaKnown RBP eCLIP12.35□□□□□ -0.43
SNCA-202ENST00000345009 BHLHA9Q7RTU4 235 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 MCOLN2Q8IZK6 566 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 C3orf20Q8ND61 904 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 ST13P5Q8NFI4 369 aaPredicted RBP12.35□□□□□ -0.43
SNCA-202ENST00000345009 DNASE1L2Q92874 299 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 ATP2A3Q93084 1043 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 PLD4Q96BZ4 506 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 SHDQ96IW2 340 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 SLC2A13Q96QE2 648 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 SELENOOQ9BVL4 669 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 MRPL47Q9HD33 250 aaKnown RBP12.35□□□□□ -0.43
SNCA-202ENST00000345009 CD320Q9NPF0 282 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 LUC7LQ9NQ29 371 aaKnown RBP12.35□□□□□ -0.43
SNCA-202ENST00000345009 TRPV5Q9NQA5 729 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 GKN1Q9NS71 199 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 PARVAQ9NVD7 372 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 WNT16Q9UBV4 365 aa12.35□□□□□ -0.43
SNCA-202ENST00000345009 DUSP12Q9UNI6 340 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms