RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 AJAP1Q9UKB5 411 aaPredicted RBP15.12■□□□□ 0.01
HMGN3-202ENST00000344726 INVSQ9Y283 1065 aa15.12■□□□□ 0.01
HMGN3-202ENST00000344726 THADAQ6YHU6 1953 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 NUP205Q92621 2012 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 MED19A0JLT2 244 aaPredicted RBP15.11■□□□□ 0.01
HMGN3-202ENST00000344726 BECN2A8MW95 431 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 GDF9O60383 454 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 EPN2O95208 641 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 APODP05090 189 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 KRT5P13647 590 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 PON1P27169 355 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 ERCC5P28715 1186 aaPredicted RBP15.11■□□□□ 0.01
HMGN3-202ENST00000344726 GRIA2P42262 883 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 MTIF2P46199 727 aaKnown RBP15.11■□□□□ 0.01
HMGN3-202ENST00000344726 DAOAP59103 153 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 MRPS21P82921 87 aaKnown RBP15.11■□□□□ 0.01
HMGN3-202ENST00000344726 LMNB2Q03252 620 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 PUM1Q14671 1186 aaKnown RBP eCLIP15.11■□□□□ 0.01
HMGN3-202ENST00000344726 CRY1Q16526 586 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 PLK5Q496M5 336 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 MIIPQ5JXC2 388 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 BTBD8Q5XKL5 378 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 GBP6Q6ZN66 633 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 PRR23CQ6ZRP0 262 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 ERMP1Q7Z2K6 904 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 CACNA2D4Q7Z3S7 1137 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 SCML4Q8N228 414 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 TSTD1Q8NFU3 115 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 EDEM1Q92611 657 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 ZC3H10Q96K80 434 aaKnown RBP15.11■□□□□ 0.01
HMGN3-202ENST00000344726 IPO9Q96P70 1041 aaKnown RBP15.11■□□□□ 0.01
HMGN3-202ENST00000344726 DUSP15Q9H1R2 295 aaPredicted RBP15.11■□□□□ 0.01
HMGN3-202ENST00000344726 ARRDC1-AS1Q9H2J1 176 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 SMOC1Q9H4F8 434 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 SIX2Q9NPC8 291 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 CNGB3Q9NQW8 809 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 RXFP3Q9NSD7 469 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 MARK1Q9P0L2 795 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 MARCH2Q9P0N8 246 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 GON4LQ3T8J9 2241 aa15.11■□□□□ 0.01
HMGN3-202ENST00000344726 SLC12A8A0AV02 714 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 GTPBP10A4D1E9 387 aaKnown RBP15.1■□□□□ 0.01
HMGN3-202ENST00000344726 NEDD8-MDP1E9PL57 170 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 CACNG3O60359 315 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 LRP3O75074 770 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 TYRP14679 529 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 BCKDHBP21953 392 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 CORO1AP31146 461 aaKnown RBP15.1■□□□□ 0.01
HMGN3-202ENST00000344726 GPD2P43304 727 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 DGKEP52429 567 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 ATXN1P54253 815 aaKnown RBP15.1■□□□□ 0.01
HMGN3-202ENST00000344726 COG7P83436 770 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 STILQ15468 1287 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 CSRP2Q16527 193 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 MAN2A1Q16706 1144 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 TPD52L1Q16890 204 aaPredicted RBP15.1■□□□□ 0.01
HMGN3-202ENST00000344726 EXOC3L4Q17RC7 722 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 BSPRYQ5W0U4 402 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 ANO7Q6IWH7 933 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 DPY19L2P1Q6NXN4 242 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 DENND1BQ6P3S1 775 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 RBM43Q6ZSC3 357 aaKnown RBP15.1■□□□□ 0.01
HMGN3-202ENST00000344726 TOGARAM2Q6ZUX3 1019 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 RSRC2Q7L4I2 434 aaKnown RBP15.1■□□□□ 0.01
HMGN3-202ENST00000344726 DGLUCYQ7Z3D6 616 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 SIX6OS1Q8N1H7 587 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 TERB1Q8NA31 727 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 BBS2Q9BXC9 721 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 SAMSN1Q9NSI8 373 aaKnown RBP15.1■□□□□ 0.01
HMGN3-202ENST00000344726 PLK2Q9NYY3 685 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 APEX2Q9UBZ4 518 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 SFMBT1Q9UHJ3 866 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 CYTH4Q9UIA0 394 aa15.1■□□□□ 0.01
HMGN3-202ENST00000344726 AGO1Q9UL18 857 aaKnown RBP15.1■□□□□ 0.01
HMGN3-202ENST00000344726 PLXND1Q9Y4D7 1925 aa15.09■□□□□ 0.01
HMGN3-202ENST00000344726 NCOR2Q9Y618 2525 aa15.09■□□□□ 0.01
HMGN3-202ENST00000344726 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.09■□□□□ 0.01
HMGN3-202ENST00000344726 LETM1O95202 739 aaPredicted RBP15.09■□□□□ 0.01
HMGN3-202ENST00000344726 TNFRSF4P43489 277 aa15.09■□□□□ 0.01
HMGN3-202ENST00000344726 RPL34P49207 117 aaKnown RBP15.09■□□□□ 0.01
HMGN3-202ENST00000344726 MFAP3P55082 362 aa15.09■□□□□ 0.01
HMGN3-202ENST00000344726 SF3A2Q15428 464 aaKnown RBP15.09■□□□□ 0.01
HMGN3-202ENST00000344726 ARHGAP44Q17R89 818 aa15.09■□□□□ 0.01
HMGN3-202ENST00000344726 PLA2G2CQ5R387 149 aa15.09■□□□□ 0.01
HMGN3-202ENST00000344726 C10orf76Q5T2E6 689 aa15.09■□□□□ 0.01
HMGN3-202ENST00000344726 ENOSF1Q7L5Y1 443 aa15.09■□□□□ 0.01
HMGN3-202ENST00000344726 DENND1CQ8IV53 801 aa15.09■□□□□ 0.01
HMGN3-202ENST00000344726 FMNL3Q8IVF7 1028 aa15.09■□□□□ 0.01
HMGN3-202ENST00000344726 FRMD1Q8N878 549 aa15.09■□□□□ 0.01
HMGN3-202ENST00000344726 OLIG1Q8TAK6 271 aa15.09■□□□□ 0.01
HMGN3-202ENST00000344726 ZNF606Q8WXB4 792 aa15.09■□□□□ 0.01
HMGN3-202ENST00000344726 BHMTQ93088 406 aa15.09■□□□□ 0.01
HMGN3-202ENST00000344726 HSFY1Q96LI6 401 aa15.09■□□□□ 0.01
HMGN3-202ENST00000344726 GBP4Q96PP9 640 aa15.09■□□□□ 0.01
HMGN3-202ENST00000344726 DNAJC17Q9NVM6 304 aaKnown RBP15.09■□□□□ 0.01
HMGN3-202ENST00000344726 DEC1Q9P2X7 70 aa15.09■□□□□ 0.01
HMGN3-202ENST00000344726 CEP192Q8TEP8 1941 aa15.09■□□□□ 0.01
HMGN3-202ENST00000344726 TBC1D3BA6NDS4 549 aa15.08■□□□□ 0
HMGN3-202ENST00000344726 PRR5-ARHGAP8B1AHC4 643 aa15.08■□□□□ 0
HMGN3-202ENST00000344726 PRRT4C9JH25 899 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms