RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 TMEM79Q9BSE2 394 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 FHDC1Q9C0D6 1143 aaPredicted RBP11.22□□□□□ -0.61
RPL28-201ENST00000344063 SEMA6AQ9H2E6 1030 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 GPATCH2LQ9NWQ4 482 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 SLC17A7Q9P2U7 560 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 RGPD2P0DJD1 1756 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 PPARGP37231 505 aaPredicted RBP11.22□□□□□ -0.61
RPL28-201ENST00000344063 BTBD8Q5XKL5 378 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 ANO7Q6IWH7 933 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 UTS2BQ765I0 119 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 DDIASQ8IXT1 998 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 ASAP3Q8TDY4 903 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 LRRC39Q96DD0 335 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 MECRQ9BV79 373 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 UNKQ9C0B0 810 aaKnown RBP11.22□□□□□ -0.61
RPL28-201ENST00000344063 PORCNQ9H237 461 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 TMEM134Q9H6X4 195 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 ARHGEF3Q9NR81 526 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 DMAC2Q9NW81 257 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 GID8Q9NWU2 228 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 DFFAO00273 331 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 TIMM44O43615 452 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 LYNP07948 512 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 DPEP1P16444 411 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 MSX2P35548 267 aaPredicted RBP11.22□□□□□ -0.61
RPL28-201ENST00000344063 GLRBP48167 497 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 SLC35G1Q2M3R5 365 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 EML3Q32P44 896 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 PRAMEF18Q5VWM3 479 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 BNC2Q6ZN30 1099 aaPredicted RBP11.22□□□□□ -0.61
RPL28-201ENST00000344063 TRABD2AQ86V40 505 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 ARL10Q8N8L6 244 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 FAXDC2Q96IV6 333 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 ZNF317Q96PQ6 595 aaPredicted RBP11.22□□□□□ -0.61
RPL28-201ENST00000344063 LRRC40Q9H9A6 602 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 ELP3Q9H9T3 547 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 SIX2Q9NPC8 291 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 ABT1Q9ULW3 272 aaKnown RBP11.22□□□□□ -0.61
RPL28-201ENST00000344063 UBQLN1Q9UMX0 589 aaKnown RBP11.22□□□□□ -0.61
RPL28-201ENST00000344063 COG5Q9UP83 839 aa11.22□□□□□ -0.61
RPL28-201ENST00000344063 H2AFYO75367 372 aaKnown RBP11.21□□□□□ -0.61
RPL28-201ENST00000344063 TOMM70O94826 608 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 ITGAVP06756 1048 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 FESP07332 822 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 RAP1GAPP47736 663 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 EIF2B2P49770 351 aaKnown RBP11.21□□□□□ -0.61
RPL28-201ENST00000344063 USP46P62068 366 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 PDAP1Q13442 181 aaKnown RBP11.21□□□□□ -0.61
RPL28-201ENST00000344063 ITGA9Q13797 1035 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 KBTBD12Q3ZCT8 623 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 CYP4X1Q8N118 509 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 OR6J1Q8NGC5 347 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 DNAJC1Q96KC8 554 aaKnown RBP11.21□□□□□ -0.61
RPL28-201ENST00000344063 MMADHCQ9H3L0 296 aaPredicted RBP11.21□□□□□ -0.61
RPL28-201ENST00000344063 ST6GALNAC4Q9H4F1 302 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 AP4E1Q9UPM8 1137 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 ATP11BQ9Y2G3 1177 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 SAC3D1A6NKF1 404 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 THRAP10827 490 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 KDELR1P24390 212 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 MIPP30301 263 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 RGS2P41220 211 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 CXCL9Q07325 125 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 ACOT1Q86TX2 421 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 CPNE8Q86YQ8 564 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 CEP19Q96LK0 163 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 MTFR1LQ9H019 292 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 SP110Q9HB58 689 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 PIDD1Q9HB75 910 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 ATXN10Q9UBB4 475 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 BARX2Q9UMQ3 279 aaPredicted RBP11.21□□□□□ -0.61
RPL28-201ENST00000344063 RPL26L1Q9UNX3 145 aaKnown RBP11.21□□□□□ -0.61
RPL28-201ENST00000344063 R3HDM2Q9Y2K5 976 aaKnown RBP11.21□□□□□ -0.61
RPL28-201ENST00000344063 COMMD3-BMI1R4GMX3 469 aa11.21□□□□□ -0.61
RPL28-201ENST00000344063 ASTN2O75129 1339 aaPredicted RBP11.21□□□□□ -0.61
RPL28-201ENST00000344063 SIGLEC16A6NMB1 481 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 TRDMT1O14717 391 aaKnown RBP11.21□□□□□ -0.62
RPL28-201ENST00000344063 SNX2O60749 519 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 MTA2O94776 668 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 RTN3O95197 1032 aaPredicted RBP11.21□□□□□ -0.62
RPL28-201ENST00000344063 CXCL8P10145 99 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 RALBP11234 206 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 FOXN2P32314 431 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 BCAT1P54687 386 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 DPYSL3Q14195 570 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 TRIM74Q86UV6 250 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 TRIM73Q86UV7 250 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 GALNT15Q8N3T1 639 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 ATPAF2Q8N5M1 289 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 SLC7A14Q8TBB6 771 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 FAM210AQ96ND0 272 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 NMUR2Q9GZQ4 415 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 ARHGEF38Q9NXL2 777 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 SLC39A10Q9ULF5 831 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 STXBP5LQ9Y2K9 1186 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 C2CD2LO14523 706 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 WFS1O76024 890 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 TAF6P49848 677 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 CHN2P52757 468 aa11.21□□□□□ -0.62
RPL28-201ENST00000344063 NME5P56597 212 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms