RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 IL31Q6EBC2 164 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 RAD9BQ6WBX8 426 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 EXOC3L1Q86VI1 746 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 CCDC63Q8NA47 563 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 ZNF419Q96HQ0 510 aaPredicted RBP7.67□□□□□ -1.18
ZNF540-202ENST00000343599 GDAP1L1Q96MZ0 367 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 USP36Q9P275 1121 aaKnown RBP7.67□□□□□ -1.18
ZNF540-202ENST00000343599 ADAMTS1Q9UHI8 967 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 PILRBQ9UKJ0 227 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 TMED5Q9Y3A6 229 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 GFPT2O94808 682 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 GSTA2P09210 222 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 CD82P27701 267 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 KRT2P35908 639 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 GTF2BQ00403 316 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 CSTF1Q05048 431 aaKnown RBP7.67□□□□□ -1.18
ZNF540-202ENST00000343599 DMC1Q14565 340 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 TAF11Q15544 211 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 KIZQ2M2Z5 673 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 N4BP2L1Q5TBK1 243 aaPredicted RBP7.67□□□□□ -1.18
ZNF540-202ENST00000343599 CENPPQ6IPU0 288 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 EMBQ6PCB8 327 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 POTEGQ6S5H5 508 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 TPRG1Q6ZUI0 275 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 PDZD4Q76G19 769 aaPredicted RBP7.67□□□□□ -1.18
ZNF540-202ENST00000343599 HEATR3Q7Z4Q2 680 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 LMNTD2Q8IXW0 634 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 GSPT2Q8IYD1 628 aaKnown RBP7.67□□□□□ -1.18
ZNF540-202ENST00000343599 CACNA2D3Q8IZS8 1091 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 FSIP1Q8NA03 581 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 CXorf38Q8TB03 319 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 IL21Q9HBE4 155 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 APOBEC2Q9Y235 224 aaKnown RBP7.67□□□□□ -1.18
ZNF540-202ENST00000343599 USP20Q9Y2K6 914 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 DAAM1Q9Y4D1 1078 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 A0A0U1RQJ8 604 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 E7ENQ6 273 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 ALOX15BO15296 676 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 FLRT2O43155 660 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 ATP9BO43861 1147 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 USO1O60763 962 aaKnown RBP7.67□□□□□ -1.18
ZNF540-202ENST00000343599 WFS1O76024 890 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 PRKCGP05129 697 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 GP1BAP07359 652 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 PAEPP09466 180 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 VDRP11473 427 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 ADKP55263 362 aaKnown RBP7.67□□□□□ -1.18
ZNF540-202ENST00000343599 PSMC1P62191 440 aaKnown RBP7.67□□□□□ -1.18
ZNF540-202ENST00000343599 PLOD1Q02809 727 aaPredicted RBP7.67□□□□□ -1.18
ZNF540-202ENST00000343599 SULT2A1Q06520 285 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 CKAP4Q07065 602 aaKnown RBP7.67□□□□□ -1.18
ZNF540-202ENST00000343599 VEPH1Q14D04 833 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 USP39Q53GS9 565 aaKnown RBP7.67□□□□□ -1.18
ZNF540-202ENST00000343599 MPP7Q5T2T1 576 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 DCP2Q8IU60 420 aaKnown RBP7.67□□□□□ -1.18
ZNF540-202ENST00000343599 CCDC117Q8IWD4 279 aaPredicted RBP7.67□□□□□ -1.18
ZNF540-202ENST00000343599 SH2D3CQ8N5H7 860 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 CD101Q93033 1021 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 ERLEC1Q96DZ1 483 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 MMS19Q96T76 1030 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 FAM192AQ9GZU8 254 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 INTUQ9ULD6 942 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 PCDHA5Q9Y5H7 936 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 MYH10P35580 1976 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 HMGB1P1B2RPK0 211 aaPredicted RBP7.66□□□□□ -1.18
ZNF540-202ENST00000343599 PI15O43692 258 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 UPP2O95045 317 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 ATP6V1C1P21283 382 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 CCR5P51681 352 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 POLE2P56282 527 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 KCNH2Q12809 1159 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 SIM2Q14190 667 aaPredicted RBP7.66□□□□□ -1.18
ZNF540-202ENST00000343599 USP30Q70CQ3 517 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 JAMLQ86YT9 394 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 LSMEM2Q8N112 164 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 MLKLQ8NB16 471 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 TSEN2Q8NCE0 465 aaKnown RBP7.66□□□□□ -1.18
ZNF540-202ENST00000343599 SLC39A13Q96H72 371 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 STK17AQ9UEE5 414 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 CCT8L1PA6NM43 557 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 H0Y858 1186 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 ERVH48-1M5A8F1 160 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 DTNBO60941 627 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 RPP40O75818 363 aaKnown RBP7.66□□□□□ -1.18
ZNF540-202ENST00000343599 ASGR2P07307 311 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 RXRGP48443 463 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 ROR1Q01973 937 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 MTAPQ13126 283 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 COBLL1Q53SF7 1204 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 FAM78AQ5JUQ0 283 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 FOXB2Q5VYV0 432 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 PAPD7Q5XG87 772 aaKnown RBP7.66□□□□□ -1.18
ZNF540-202ENST00000343599 THEM5Q8N1Q8 247 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 WHAMMQ8TF30 809 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 KCTD13Q8WZ19 329 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 BHMTQ93088 406 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 C8orf76Q96K31 380 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 EIF2AK1Q9BQI3 630 aaKnown RBP7.66□□□□□ -1.18
ZNF540-202ENST00000343599 LXNQ9BS40 222 aa7.66□□□□□ -1.18
ZNF540-202ENST00000343599 CCSER2Q9H7U1 834 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms