RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 DEPDC1BQ8WUY9 529 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 CDRT15Q96T59 188 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 DDX56Q9NY93 547 aaKnown RBP15.36■□□□□ 0.05
CLCN1-201ENST00000343257 CIDEBQ9UHD4 219 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 CCNL1Q9UK58 526 aaPredicted RBP15.36■□□□□ 0.05
CLCN1-201ENST00000343257 SBF2Q86WG5 1849 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 DHX15O43143 795 aaKnown RBP15.36■□□□□ 0.05
CLCN1-201ENST00000343257 TNFAIP8O95379 198 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 MAPTP10636 758 aaKnown RBP15.36■□□□□ 0.05
CLCN1-201ENST00000343257 GRIA1P42261 906 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 CDO1Q16878 200 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 ZACNQ401N2 412 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 PPM1JQ5JR12 505 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 CASC4Q6P4E1 433 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 KBTBD6Q86V97 674 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 ZBTB8BQ8NAP8 495 aaPredicted RBP15.36■□□□□ 0.05
CLCN1-201ENST00000343257 JADE3Q92613 823 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 ZNF180Q9UJW8 692 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 SH3GLB1Q9Y371 365 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 HMX2A2RU54 273 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 TMX2-CTNND1H3BSU7 103 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 NFIBO00712 420 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 ZBTB14O43829 449 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 KRT38O76015 456 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 CSPG5O95196 566 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 COX4I1P13073 169 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 XRCC1P18887 633 aaPredicted RBP15.36■□□□□ 0.05
CLCN1-201ENST00000343257 ADORA2AP29274 412 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 ARRB2P32121 409 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 TBCCQ15814 346 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 SH3PXD2AQ5TCZ1 1133 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 TRIM72Q6ZMU5 477 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 C15orf52Q6ZUT6 534 aaKnown RBP15.36■□□□□ 0.05
CLCN1-201ENST00000343257 LDHDQ86WU2 507 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 BTBD9Q96Q07 612 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 TUT1Q9H6E5 874 aaKnown RBP15.36■□□□□ 0.05
CLCN1-201ENST00000343257 EHMT1Q9H9B1 1298 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 GPATCH2LQ9NWQ4 482 aa15.36■□□□□ 0.05
CLCN1-201ENST00000343257 ZNF219Q9P2Y4 722 aaPredicted RBP15.36■□□□□ 0.05
CLCN1-201ENST00000343257 PAIP2BQ9ULR5 123 aaKnown RBP15.36■□□□□ 0.05
CLCN1-201ENST00000343257 AMHP03971 560 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 C4BPAP04003 597 aaKnown RBP15.35■□□□□ 0.05
CLCN1-201ENST00000343257 KRT3P12035 628 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 ENO3P13929 434 aaPredicted RBP15.35■□□□□ 0.05
CLCN1-201ENST00000343257 OSBPP22059 807 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 PRKG1Q13976 671 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 FLOT2Q14254 428 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 FAM98CQ17RN3 349 aaKnown RBP15.35■□□□□ 0.05
CLCN1-201ENST00000343257 RARS2Q5T160 578 aaKnown RBP15.35■□□□□ 0.05
CLCN1-201ENST00000343257 BBS12Q6ZW61 710 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 LPCAT2Q7L5N7 544 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 HACE1Q8IYU2 909 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 RNF169Q8NCN4 708 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 MARK4Q96L34 752 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 RIT2Q99578 217 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 PKP2Q99959 881 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 EPB41L1Q9H4G0 881 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 PSMD13Q9UNM6 376 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 CEPT1Q9Y6K0 416 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 CST3P01034 146 aaPredicted RBP15.35■□□□□ 0.05
CLCN1-201ENST00000343257 CDH2P19022 906 aaPredicted RBP15.35■□□□□ 0.05
CLCN1-201ENST00000343257 PDE1CQ14123 709 aaPredicted RBP15.35■□□□□ 0.05
CLCN1-201ENST00000343257 PIGHQ14442 188 aaPredicted RBP15.35■□□□□ 0.05
CLCN1-201ENST00000343257 UNC5AQ6ZN44 842 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 ANKRD23Q86SG2 305 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 LILRA2Q8N149 483 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 TMEM130Q8N3G9 435 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 PPP4R1Q8TF05 950 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 CMTM5Q96DZ9 223 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 VCPIP1Q96JH7 1222 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 LENG8Q96PV6 779 aaPredicted RBP15.35■□□□□ 0.05
CLCN1-201ENST00000343257 TDRD3Q9H7E2 651 aaKnown RBP15.35■□□□□ 0.05
CLCN1-201ENST00000343257 CLEC11AQ9Y240 323 aa15.35■□□□□ 0.05
CLCN1-201ENST00000343257 TESPA1A2RU30 521 aaPredicted RBP15.34■□□□□ 0.05
CLCN1-201ENST00000343257 XPOTO43592 962 aaKnown RBP15.34■□□□□ 0.05
CLCN1-201ENST00000343257 CALB1P05937 261 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 MTMR1Q13613 665 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 WDTC1Q8N5D0 677 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 GIPC3Q8TF64 312 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 TFAP2BQ92481 460 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 PGLYRP2Q96PD5 576 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 PLAC1Q9HBJ0 212 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 RBAKQ9NYW8 714 aaPredicted RBP15.34■□□□□ 0.05
CLCN1-201ENST00000343257 ADCY6O43306 1168 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 IL1BP01584 269 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 OATP04181 439 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 FGF3P11487 239 aaPredicted RBP15.34■□□□□ 0.05
CLCN1-201ENST00000343257 THOP1P52888 689 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 CDH6P55285 790 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 XIAPP98170 497 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 TKFCQ3LXA3 575 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 TNS4Q8IZW8 715 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 GMCL1P1Q8NEA9 526 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 BHLHE22Q8NFJ8 381 aaPredicted RBP15.34■□□□□ 0.05
CLCN1-201ENST00000343257 ZFRQ96KR1 1074 aaKnown RBP15.34■□□□□ 0.05
CLCN1-201ENST00000343257 POPDC2Q9HBU9 364 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 INIPQ9NRY2 104 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 ITGA11Q9UKX5 1188 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 ARHGAP26Q9UNA1 814 aa15.34■□□□□ 0.05
CLCN1-201ENST00000343257 MRPL11Q9Y3B7 192 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms