RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 TTC30AQ86WT1 665 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 PCYOX1LQ8NBM8 494 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 IL31RAQ8NI17 732 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 ADAM32Q8TC27 787 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 NSMCE4AQ9NXX6 385 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 PRKAG2Q9UGJ0 569 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 SLC12A4Q9UP95 1085 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 GAKO14976 1311 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 TMEM247A6NEH6 219 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 RRN3P2A6NIE6 340 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 SPATA31C1P0DKV0 1188 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 AMPD1P23109 780 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 DSG3P32926 999 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 CHKAP35790 457 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 PNPLA4P41247 253 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 GALK1P51570 392 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 BCAT1P54687 386 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 MRPS15P82914 257 aaKnown RBP8.3□□□□□ -1.08
UBE4B-202ENST00000343090 GSTA3Q16772 222 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 ZNF484Q5JVG2 852 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 LRP10Q7Z4F1 713 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 CCDC60Q8IWA6 550 aaPredicted RBP8.3□□□□□ -1.08
UBE4B-202ENST00000343090 POU5F2Q8N7G0 328 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 NKX2-3Q8TAU0 364 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 CALML6Q8TD86 181 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 SH3KBP1Q96B97 665 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 CNDP1Q96KN2 507 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 DACH2Q96NX9 599 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 R3HDM2Q9Y2K5 976 aaKnown RBP8.3□□□□□ -1.08
UBE4B-202ENST00000343090 CASZ1Q86V15 1759 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 LACTBL1A8MY62 500 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 GOLGA8TH3BQL2 631 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 PRPF4O43172 522 aaKnown RBP eCLIP8.3□□□□□ -1.08
UBE4B-202ENST00000343090 CYP3A4P08684 503 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 VAV1P15498 845 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 AKT1P31749 480 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 RPA3P35244 121 aaPredicted RBP8.3□□□□□ -1.08
UBE4B-202ENST00000343090 ABCE1P61221 599 aaKnown RBP8.3□□□□□ -1.08
UBE4B-202ENST00000343090 FAM83EQ2M2I3 478 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 PARP6Q2NL67 630 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 ARSHQ5FYA8 562 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 N4BP2L1Q5TBK1 243 aaPredicted RBP8.3□□□□□ -1.08
UBE4B-202ENST00000343090 NPNTQ6UXI9 565 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 LPCAT2Q7L5N7 544 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 USP13Q92995 863 aaPredicted RBP8.3□□□□□ -1.08
UBE4B-202ENST00000343090 FICDQ9BVA6 458 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 PKD2L2Q9NZM6 624 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 SHOC2Q9UQ13 582 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 SH3GLB1Q9Y371 365 aa8.3□□□□□ -1.08
UBE4B-202ENST00000343090 C2CD2LO14523 706 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 LSM1O15116 133 aaKnown RBP8.29□□□□□ -1.08
UBE4B-202ENST00000343090 MYO1DO94832 1006 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 OCM2P0CE71 109 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 OCMP0CE72 109 aaPredicted RBP8.29□□□□□ -1.08
UBE4B-202ENST00000343090 CPA3P15088 417 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 MIPP30301 263 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 NNMTP40261 264 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 MTTPP55157 894 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 CCDC15Q0P6D6 951 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 PTK6Q13882 451 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 PTRHD1Q6GMV3 140 aaKnown RBP8.29□□□□□ -1.08
UBE4B-202ENST00000343090 GLB1LQ6UWU2 654 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 IRF2BP2Q7Z5L9 587 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 PRELID2Q8N945 189 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 C17orf80Q9BSJ5 609 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 PAIP1Q9H074 479 aaKnown RBP8.29□□□□□ -1.08
UBE4B-202ENST00000343090 COG4Q9H9E3 785 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 TAGLN3Q9UI15 199 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 C17orf102A2RUQ5 167 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 IQCA1LA6NCM1 817 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 TM9SF1O15321 606 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 ZSCAN9O15535 394 aaPredicted RBP8.29□□□□□ -1.08
UBE4B-202ENST00000343090 MTSS1O43312 755 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 ANXA9O76027 345 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 ENDOD1O94919 500 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 NFKBIAP25963 317 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 THPOP40225 353 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 TKTL1P51854 596 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 HDAC4P56524 1084 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 ADRM1Q16186 407 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 PDPK2PQ6A1A2 396 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 C6orf89Q6UWU4 347 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 RBM44Q6ZP01 1051 aaKnown RBP8.29□□□□□ -1.08
UBE4B-202ENST00000343090 GPR141Q7Z602 305 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 UCMAQ8WVF2 138 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 VPS50Q96JG6 964 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 RPRD1AQ96P16 312 aaPredicted RBP8.29□□□□□ -1.08
UBE4B-202ENST00000343090 SPATC1LQ9H0A9 340 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 LRRC40Q9H9A6 602 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 SAR1AQ9NR31 198 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 DCCP43146 1447 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 C5orf60A6NFR6 353 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 FCHO1O14526 889 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 PPP1R11O60927 126 aaPredicted RBP8.29□□□□□ -1.08
UBE4B-202ENST00000343090 LINGO3P0C6S8 592 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 MGAT1P26572 445 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 ABCG1P45844 678 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 TRPC1P48995 793 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 KCNK10P57789 538 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 ITGA9Q13797 1035 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms