RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 TRIM43BA6NCK2 446 aa15.24■□□□□ 0.03
PBX3-201ENST00000342287 RAD51CO43502 376 aa15.24■□□□□ 0.03
PBX3-201ENST00000342287 B3GAT3O94766 335 aa15.24■□□□□ 0.03
PBX3-201ENST00000342287 ZFXP17010 805 aaPredicted RBP15.24■□□□□ 0.03
PBX3-201ENST00000342287 PTPN1P18031 435 aaKnown RBP15.24■□□□□ 0.03
PBX3-201ENST00000342287 PSMA2P25787 234 aa15.24■□□□□ 0.03
PBX3-201ENST00000342287 RGS7P49802 495 aa15.24■□□□□ 0.03
PBX3-201ENST00000342287 MAP7D1Q3KQU3 841 aa15.24■□□□□ 0.03
PBX3-201ENST00000342287 OR6B2Q6IFH4 312 aa15.24■□□□□ 0.03
PBX3-201ENST00000342287 LRIG3Q6UXM1 1119 aa15.24■□□□□ 0.03
PBX3-201ENST00000342287 SLC2A14Q8TDB8 520 aa15.24■□□□□ 0.03
PBX3-201ENST00000342287 SELENOSQ9BQE4 189 aa15.24■□□□□ 0.03
PBX3-201ENST00000342287 MTUS1Q9ULD2 1270 aa15.24■□□□□ 0.03
PBX3-201ENST00000342287 PITPNM1O00562 1244 aa15.23■□□□□ 0.03
PBX3-201ENST00000342287 HSPA9P38646 679 aaKnown RBP15.23■□□□□ 0.03
PBX3-201ENST00000342287 ARHGAP18Q8N392 663 aa15.23■□□□□ 0.03
PBX3-201ENST00000342287 WDR60Q8WVS4 1066 aa15.23■□□□□ 0.03
PBX3-201ENST00000342287 LINC01599Q8WXQ3 324 aa15.23■□□□□ 0.03
PBX3-201ENST00000342287 HNRNPABQ99729 332 aaKnown RBP15.23■□□□□ 0.03
PBX3-201ENST00000342287 DDX43Q9NXZ2 648 aaKnown RBP15.23■□□□□ 0.03
PBX3-201ENST00000342287 SH3GLB1Q9Y371 365 aa15.23■□□□□ 0.03
PBX3-201ENST00000342287 PTDSS1P48651 473 aaKnown RBP15.23■□□□□ 0.03
PBX3-201ENST00000342287 OXCT1P55809 520 aa15.23■□□□□ 0.03
PBX3-201ENST00000342287 TIGD5Q53EQ6 642 aa15.23■□□□□ 0.03
PBX3-201ENST00000342287 SH2D4BQ5SQS7 431 aa15.23■□□□□ 0.03
PBX3-201ENST00000342287 FAM183BPQ6ZVS7 135 aa15.23■□□□□ 0.03
PBX3-201ENST00000342287 ZDHHC17Q8IUH5 632 aa15.23■□□□□ 0.03
PBX3-201ENST00000342287 EXD1Q8NHP7 514 aa15.23■□□□□ 0.03
PBX3-201ENST00000342287 BRCA2P51587 3418 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 H0YGN5 161 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 PIK3R2O00459 728 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 FSCN2O14926 492 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 NBNO60934 754 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 KRT38O76015 456 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 TPBGLP0DKB5 382 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 COL6A1P12109 1028 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 CHN1P15882 459 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 HOXD12P35452 270 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 ACAP1Q15027 740 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 DCLRE1AQ6PJP8 1040 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 EMC1Q8N766 993 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 NUDCD1Q96RS6 583 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 CYLDQ9NQC7 956 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 NFS1Q9Y697 457 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 NDUFB5O43674 189 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 PQBP1O60828 265 aaKnown RBP15.22■□□□□ 0.03
PBX3-201ENST00000342287 ODC1P11926 461 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 ACAT1P24752 427 aaKnown RBP15.22■□□□□ 0.03
PBX3-201ENST00000342287 CETN2P41208 172 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 CLCN2P51788 898 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 UAP1Q16222 522 aaPredicted RBP15.22■□□□□ 0.03
PBX3-201ENST00000342287 PLEKHG4Q58EX7 1191 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 RCOR2Q8IZ40 523 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 SPATA18Q8TC71 538 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 FAM136AQ96C01 138 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 KANSL3Q9P2N6 904 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 AMACRQ9UHK6 382 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 ATP8A1Q9Y2Q0 1164 aa15.22■□□□□ 0.03
PBX3-201ENST00000342287 TIMM13Q9Y5L4 95 aaPredicted RBP15.22■□□□□ 0.03
PBX3-201ENST00000342287 ACADSBP45954 432 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 IFNAR2P48551 515 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 RPL34P49207 117 aaKnown RBP15.21■□□□□ 0.03
PBX3-201ENST00000342287 SLC6A3Q01959 620 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 GPNMBQ14956 572 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 KCTD19Q17RG1 926 aaPredicted RBP15.21■□□□□ 0.03
PBX3-201ENST00000342287 NOMO2Q5JPE7 1267 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 ZNF280DQ6N043 979 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 SCUBE3Q8IX30 993 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 IQCF2Q8IXL9 164 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 DBF4BQ8NFT6 615 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 URGCPQ8TCY9 931 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 LZICQ8WZA0 190 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 HSFY1Q96LI6 401 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 NR1H4Q96RI1 486 aaPredicted RBP15.21■□□□□ 0.03
PBX3-201ENST00000342287 DDX50Q9BQ39 737 aaKnown RBP15.21■□□□□ 0.03
PBX3-201ENST00000342287 DUSP16Q9BY84 665 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 ZNF180Q9UJW8 692 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 CHRNA3P32297 505 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 GJC1P36383 396 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 ZNF143P52747 638 aaPredicted RBP15.21■□□□□ 0.03
PBX3-201ENST00000342287 BNIP1Q12981 228 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 SLC44A4Q53GD3 710 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 CLLU1OSQ5K130 101 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 AGBL2Q5U5Z8 902 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 DUS1LQ6P1R4 473 aaKnown RBP15.21■□□□□ 0.03
PBX3-201ENST00000342287 ZC3H18Q86VM9 953 aaKnown RBP15.21■□□□□ 0.03
PBX3-201ENST00000342287 METTL23Q86XA0 190 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 PRELID2Q8N945 189 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 FAM192AQ9GZU8 254 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.21■□□□□ 0.03
PBX3-201ENST00000342287 ASNSD1Q9NWL6 643 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 TMEM161AQ9NX61 479 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 DDX56Q9NY93 547 aaKnown RBP15.21■□□□□ 0.03
PBX3-201ENST00000342287 DSEQ9UL01 958 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 CDH9Q9ULB4 789 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 ZNF711Q9Y462 761 aa15.21■□□□□ 0.03
PBX3-201ENST00000342287 TCRBV7S2A1N4TA0A589 114 aa15.2■□□□□ 0.02
PBX3-201ENST00000342287 ENPP3O14638 875 aa15.2■□□□□ 0.02
PBX3-201ENST00000342287 PHF2O75151 1096 aa15.2■□□□□ 0.02
PBX3-201ENST00000342287 PEX11AO75192 247 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms