RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 CWF19L1Q69YN2 538 aaKnown RBP13.57□□□□□ -0.24
COL18A1-201ENST00000342220 DARS2Q6PI48 645 aaKnown RBP13.57□□□□□ -0.24
COL18A1-201ENST00000342220 SLC24A5Q71RS6 500 aa13.57□□□□□ -0.24
COL18A1-201ENST00000342220 PIGWQ7Z7B1 504 aa13.57□□□□□ -0.24
COL18A1-201ENST00000342220 EXOC3L1Q86VI1 746 aa13.57□□□□□ -0.24
COL18A1-201ENST00000342220 TAX1BP1Q86VP1 789 aa13.57□□□□□ -0.24
COL18A1-201ENST00000342220 MYLPFQ96A32 169 aa13.57□□□□□ -0.24
COL18A1-201ENST00000342220 DDX27Q96GQ7 796 aaKnown RBP13.57□□□□□ -0.24
COL18A1-201ENST00000342220 AAASQ9NRG9 546 aa13.57□□□□□ -0.24
COL18A1-201ENST00000342220 ZNF232Q9UNY5 417 aa13.57□□□□□ -0.24
COL18A1-201ENST00000342220 ARID2Q68CP9 1835 aa13.57□□□□□ -0.24
COL18A1-201ENST00000342220 SIGLEC16A6NMB1 481 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 TP73O15350 636 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 AHCYL1O43865 530 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 CHKAP35790 457 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 GPR15P49685 360 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 LBX1P52954 281 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 GPS1Q13098 491 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 CA9Q16790 459 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 RWDD4Q6NW29 188 aaKnown RBP13.56□□□□□ -0.24
COL18A1-201ENST00000342220 SPATA2LQ8IUW3 424 aaPredicted RBP13.56□□□□□ -0.24
COL18A1-201ENST00000342220 ANKS4BQ8N8V4 417 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 GLIS1Q8NBF1 620 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 ACTL9Q8TC94 416 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 BHMTQ93088 406 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 PPP1R10Q96QC0 940 aaKnown RBP13.56□□□□□ -0.24
COL18A1-201ENST00000342220 TMEM109Q9BVC6 243 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 CRTAC1Q9NQ79 661 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 TBK1Q9UHD2 729 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 TET1Q8NFU7 2136 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 MOXD2PA6NHM9 499 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 CABYRO75952 493 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 ODC1P11926 461 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 ATF2P15336 505 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 SELPP16109 830 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 SLC1A1P43005 524 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 TAF12Q16514 161 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 SPOCD1Q6ZMY3 1216 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 GPRIN1Q7Z2K8 1008 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 MIB1Q86YT6 1006 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 MYLK4Q86YV6 388 aaPredicted RBP13.56□□□□□ -0.24
COL18A1-201ENST00000342220 FAM71DQ8N9W8 422 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 C9orf72Q96LT7 481 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 DNAI2Q9GZS0 605 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 DDIT4Q9NX09 232 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 SAMD15Q9P1V8 674 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 TTC3P53804 2025 aa13.56□□□□□ -0.24
COL18A1-201ENST00000342220 A0A1B0GVG6 124 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 DIAPH2O60879 1101 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 NBNO60934 754 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 FESP07332 822 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 SPATA31D3P0C874 917 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 ARSEP51690 589 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 OTUD4Q01804 1114 aaKnown RBP13.55□□□□□ -0.24
COL18A1-201ENST00000342220 XRCC4Q13426 336 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 IRF5Q13568 498 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 TNFAIP8L3Q5GJ75 292 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 SYPL2Q5VXT5 272 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 SPATA31D4Q6ZUB0 917 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 NT5DC4Q86YG4 428 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 THEM5Q8N1Q8 247 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 GIPC2Q8TF65 315 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 AUTS2Q8WXX7 1259 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 NACA2Q9H009 215 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 LRRC19Q9H756 370 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 MLXIPLQ9NP71 852 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 TBC1D13Q9NVG8 400 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 CTNNAL1Q9UBT7 734 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 GGT7Q9UJ14 662 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 GIT1Q9Y2X7 761 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 TJP3O95049 919 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 TUSC3Q13454 348 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 BFSP2Q13515 415 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 C12orf50Q8NA57 414 aaPredicted RBP13.55□□□□□ -0.24
COL18A1-201ENST00000342220 ANKRD52Q8NB46 1076 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 SPATA18Q8TC71 538 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 P3H4Q92791 437 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 TBCBQ99426 244 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.55□□□□□ -0.243e-7■■■■■ 28.4
COL18A1-201ENST00000342220 NRP1O14786 923 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 PFKMP08237 780 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 LINGO3P0C6S8 592 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 KCNE1P15382 129 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 NPR3P17342 541 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 SLC6A3Q01959 620 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 PPP2R5DQ14738 602 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 CTXN3Q4LDR2 81 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 FAM133BQ5BKY9 247 aaKnown RBP13.55□□□□□ -0.24
COL18A1-201ENST00000342220 CCSAPQ6IQ19 270 aaPredicted RBP13.55□□□□□ -0.24
COL18A1-201ENST00000342220 TRNP1Q6NT89 227 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 ALKAL1Q6UXT8 129 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.55□□□□□ -0.241e-14■■■□□ 16.3
COL18A1-201ENST00000342220 CROCCP2Q86T23 111 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 TTC9BQ8N6N2 239 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 UBR7Q8N806 425 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 PXYLP1Q8TE99 480 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 ZNF570Q96NI8 536 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 RUNDC3BQ96NL0 473 aa13.55□□□□□ -0.24
COL18A1-201ENST00000342220 UPF3AQ9H1J1 476 aaKnown RBP13.55□□□□□ -0.24
COL18A1-201ENST00000342220 TMLHEQ9NVH6 421 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms