RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 POLMQ9NP87 494 aaPredicted RBP3.7□□□□□ -1.82
CCDC66-202ENST00000341455 EVLQ9UI08 416 aaPredicted RBP3.7□□□□□ -1.82
CCDC66-202ENST00000341455 STOML2Q9UJZ1 356 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 NOCTQ9UK39 431 aaKnown RBP3.7□□□□□ -1.82
CCDC66-202ENST00000341455 NFE2L3Q9Y4A8 694 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 HES2Q9Y543 173 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 PPEF2O14830 753 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 GRM6O15303 877 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 CST3P01034 146 aaPredicted RBP3.7□□□□□ -1.82
CCDC66-202ENST00000341455 CYP1A1P04798 512 aaPredicted RBP3.7□□□□□ -1.82
CCDC66-202ENST00000341455 WEE2P0C1S8 567 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 POLR2BP30876 1174 aaKnown RBP3.7□□□□□ -1.82
CCDC66-202ENST00000341455 ALDH7A1P49419 539 aaKnown RBP3.7□□□□□ -1.82
CCDC66-202ENST00000341455 RAD23BP54727 409 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 RAPGEF1Q13905 1077 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 TEAD4Q15561 434 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 ASTE1Q2TB18 679 aaPredicted RBP3.7□□□□□ -1.82
CCDC66-202ENST00000341455 RTP2Q5QGT7 225 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 SYCE2Q6PIF2 218 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 TRIM72Q6ZMU5 477 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 GBP6Q6ZN66 633 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 PAQR9Q6ZVX9 377 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 ZNF438Q7Z4V0 828 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 GPR149Q86SP6 731 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 OSTM1Q86WC4 334 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 NELFCDQ8IXH7 590 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 ABI1Q8IZP0 508 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 ZNF295-AS1Q8N0V1 137 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 SLC4A11Q8NBS3 891 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 SLC30A5Q8TAD4 765 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 ZNF461Q8TAF7 563 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 TAS1R2Q8TE23 839 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 PPM1EQ8WY54 764 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 ZNF707Q96C28 371 aaPredicted RBP3.7□□□□□ -1.82
CCDC66-202ENST00000341455 SENP8Q96LD8 212 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 KREMEN1Q96MU8 473 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.7□□□□□ -1.82
CCDC66-202ENST00000341455 PHACTR1Q9C0D0 580 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 EHD2Q9NZN4 543 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 IMPACTQ9P2X3 320 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 CAPN11Q9UMQ6 739 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 NUB1Q9Y5A7 615 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 BDP1A6H8Y1 2624 aa3.7□□□□□ -1.82
CCDC66-202ENST00000341455 CHD9Q3L8U1 2897 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 CUL9Q8IWT3 2517 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 F8VZ95 297 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 CLIC2O15247 247 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 ATXN7O15265 892 aaPredicted RBP3.69□□□□□ -1.82
CCDC66-202ENST00000341455 CBFA2T2O43439 604 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 CSDE1O75534 798 aaKnown RBP3.69□□□□□ -1.82
CCDC66-202ENST00000341455 MTA2O94776 668 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 IGLV3-25P01717 112 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 ITGB3P05106 788 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 GLI1P08151 1106 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 TMEM191BP0C7N4 346 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 VDRP11473 427 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 ATP1A3P13637 1013 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 MX2P20592 715 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 CTNNB1P35222 781 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 ZNF165P49910 485 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 CYP2J2P51589 502 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 NEK2P51955 445 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 ERVFC1P60507 584 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 CNGA2Q16280 664 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 SEZ6Q53EL9 994 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 PERM1Q5SV97 790 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 FBXW10Q5XX13 1052 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 CAVIN1Q6NZI2 390 aaKnown RBP3.69□□□□□ -1.82
CCDC66-202ENST00000341455 MSANTD2Q6P1R3 559 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 CCDC149Q6ZUS6 474 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 CCDC186Q7Z3E2 898 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 ZDHHC17Q8IUH5 632 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 VSTM4Q8IW00 320 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 THNSL1Q8IYQ7 743 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 DCP1BQ8IZD4 617 aaKnown RBP3.69□□□□□ -1.82
CCDC66-202ENST00000341455 ADGRF2Q8IZF7 708 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 PJA1Q8NG27 643 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 OR10T2Q8NGX3 314 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 POF1BQ8WVV4 589 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 PSMG2Q969U7 264 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 AZIN2Q96A70 460 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 PLD4Q96BZ4 506 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 PGAP3Q96FM1 320 aaPredicted RBP3.69□□□□□ -1.82
CCDC66-202ENST00000341455 VCPIP1Q96JH7 1222 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 PAAF1Q9BRP4 392 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 ELOVL4Q9GZR5 314 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 SUV39H2Q9H5I1 410 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 MRPL17Q9NRX2 175 aaKnown RBP3.69□□□□□ -1.82
CCDC66-202ENST00000341455 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.69□□□□□ -1.82
CCDC66-202ENST00000341455 MTMR11A4FU01 709 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 XPO1O14980 1071 aaKnown RBP3.69□□□□□ -1.82
CCDC66-202ENST00000341455 PHACTR2O75167 634 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 ENDOD1O94919 500 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 IGLV3-27P01718 113 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 URODP06132 367 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 H2AFB1P0C5Y9 115 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 H2AFB2P0C5Z0 115 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 COL8A1P27658 744 aa3.69□□□□□ -1.82
CCDC66-202ENST00000341455 TKTP29401 623 aaKnown RBP3.69□□□□□ -1.82
CCDC66-202ENST00000341455 SOX5P35711 763 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms