RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 CLP1Q92989 425 aaKnown RBP18.04■□□□□ 0.48
CLDN4-201ENST00000340958 CCDC114Q96M63 670 aa18.04■□□□□ 0.48
CLDN4-201ENST00000340958 HERPUD2Q9BSE4 406 aa18.04■□□□□ 0.48
CLDN4-201ENST00000340958 PIGVQ9NUD9 493 aa18.04■□□□□ 0.48
CLDN4-201ENST00000340958 CALCOCO1Q9P1Z2 691 aa18.04■□□□□ 0.48
CLDN4-201ENST00000340958 UTP11Q9Y3A2 253 aaKnown RBP18.04■□□□□ 0.48
CLDN4-201ENST00000340958 C3orf70A6NLC5 250 aaPredicted RBP18.03■□□□□ 0.48
CLDN4-201ENST00000340958 CST8O60676 142 aa18.03■□□□□ 0.48
CLDN4-201ENST00000340958 ERLIN1O75477 346 aa18.03■□□□□ 0.48
CLDN4-201ENST00000340958 VNN2O95498 520 aa18.03■□□□□ 0.48
CLDN4-201ENST00000340958 ATF2P15336 505 aa18.03■□□□□ 0.48
CLDN4-201ENST00000340958 COILP38432 576 aaPredicted RBP18.03■□□□□ 0.48
CLDN4-201ENST00000340958 USP46P62068 366 aa18.03■□□□□ 0.48
CLDN4-201ENST00000340958 KLF1Q13351 362 aaPredicted RBP18.03■□□□□ 0.48
CLDN4-201ENST00000340958 DHX34Q14147 1143 aaKnown RBP18.03■□□□□ 0.48
CLDN4-201ENST00000340958 EFHC2Q5JST6 749 aa18.03■□□□□ 0.48
CLDN4-201ENST00000340958 CYP4V2Q6ZWL3 525 aaPredicted RBP18.03■□□□□ 0.48
CLDN4-201ENST00000340958 ZDHHC14Q8IZN3 488 aa18.03■□□□□ 0.48
CLDN4-201ENST00000340958 ATG4AQ8WYN0 398 aa18.03■□□□□ 0.48
CLDN4-201ENST00000340958 HAUS1Q96CS2 278 aa18.03■□□□□ 0.48
CLDN4-201ENST00000340958 WDCPQ9H6R7 721 aa18.03■□□□□ 0.48
CLDN4-201ENST00000340958 EPB41L5Q9HCM4 733 aa18.03■□□□□ 0.48
CLDN4-201ENST00000340958 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.03■□□□□ 0.48
CLDN4-201ENST00000340958 MTMR10Q9NXD2 777 aa18.03■□□□□ 0.48
CLDN4-201ENST00000340958 GMIPQ9P107 970 aa18.03■□□□□ 0.48
CLDN4-201ENST00000340958 EFR3BQ9Y2G0 817 aa18.03■□□□□ 0.48
CLDN4-201ENST00000340958 RWDD3Q9Y3V2 267 aa18.03■□□□□ 0.48
CLDN4-201ENST00000340958 SLC38A8A6NNN8 435 aa18.02■□□□□ 0.48
CLDN4-201ENST00000340958 TTI1O43156 1089 aa18.02■□□□□ 0.48
CLDN4-201ENST00000340958 ENDOD1O94919 500 aa18.02■□□□□ 0.48
CLDN4-201ENST00000340958 FNTAP49354 379 aa18.02■□□□□ 0.48
CLDN4-201ENST00000340958 VSNL1P62760 191 aa18.02■□□□□ 0.48
CLDN4-201ENST00000340958 MTMR3Q13615 1198 aa18.02■□□□□ 0.48
CLDN4-201ENST00000340958 DPYSL3Q14195 570 aa18.02■□□□□ 0.48
CLDN4-201ENST00000340958 GRIN2CQ14957 1233 aa18.02■□□□□ 0.48
CLDN4-201ENST00000340958 SIX1Q15475 284 aaPredicted RBP18.02■□□□□ 0.48
CLDN4-201ENST00000340958 BEND5Q7L4P6 421 aa18.02■□□□□ 0.48
CLDN4-201ENST00000340958 DQX1Q8TE96 717 aaKnown RBP18.02■□□□□ 0.48
CLDN4-201ENST00000340958 ANKRD7Q92527 254 aa18.02■□□□□ 0.48
CLDN4-201ENST00000340958 GUCD1Q96NT3 240 aa18.02■□□□□ 0.48
CLDN4-201ENST00000340958 FAM118BQ9BPY3 351 aa18.02■□□□□ 0.48
CLDN4-201ENST00000340958 LRRC19Q9H756 370 aa18.02■□□□□ 0.48
CLDN4-201ENST00000340958 ENTPD7Q9NQZ7 604 aa18.02■□□□□ 0.48
CLDN4-201ENST00000340958 TLR8Q9NR97 1041 aaKnown RBP18.02■□□□□ 0.48
CLDN4-201ENST00000340958 COMMD8Q9NX08 183 aa18.02■□□□□ 0.48
CLDN4-201ENST00000340958 FEZ2Q9UHY8 353 aaPredicted RBP18.02■□□□□ 0.48
CLDN4-201ENST00000340958 DMGDHQ9UI17 866 aaKnown RBP18.02■□□□□ 0.48
CLDN4-201ENST00000340958 FZD10Q9ULW2 581 aa18.02■□□□□ 0.48
CLDN4-201ENST00000340958 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.02■□□□□ 0.47
CLDN4-201ENST00000340958 ABLIM3O94929 683 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 CXCL14O95715 111 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 CTSAP10619 480 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 BMPR1AP36894 532 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 ARL4AP40617 200 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 KCNJ1P48048 391 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 ADCY2Q08462 1091 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 TAF10Q12962 218 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 MMRN1Q13201 1228 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 RAB33AQ14088 237 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 TFDP2Q14188 446 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 VEPH1Q14D04 833 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 BRD3Q15059 726 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 PPP1R7Q15435 360 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 CYP1B1Q16678 543 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 CA9Q16790 459 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 OTUD1Q5VV17 481 aaPredicted RBP18.02■□□□□ 0.47
CLDN4-201ENST00000340958 WDR93Q6P2C0 686 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 FBXO38Q6PIJ6 1188 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 SCD5Q86SK9 330 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 TAC4Q86UU9 113 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 TTC13Q8NBP0 860 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 GRK7Q8WTQ7 553 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 IFT81Q8WYA0 676 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 RUBCNQ92622 972 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 DCLK3Q9C098 648 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 RAB17Q9H0T7 212 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 NMUR1Q9HB89 426 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 PCDH18Q9HCL0 1135 aa18.02■□□□□ 0.47
CLDN4-201ENST00000340958 R3HDM2Q9Y2K5 976 aaKnown RBP18.02■□□□□ 0.47
CLDN4-201ENST00000340958 LINC01553A4QN01 128 aa18.01■□□□□ 0.47
CLDN4-201ENST00000340958 SEC24AO95486 1093 aa18.01■□□□□ 0.47
CLDN4-201ENST00000340958 ECEL1O95672 775 aa18.01■□□□□ 0.47
CLDN4-201ENST00000340958 CCNG2Q16589 344 aa18.01■□□□□ 0.47
CLDN4-201ENST00000340958 GSTA5Q7RTV2 222 aa18.01■□□□□ 0.47
CLDN4-201ENST00000340958 PSTKQ8IV42 348 aaKnown RBP18.01■□□□□ 0.47
CLDN4-201ENST00000340958 C12orf50Q8NA57 414 aaPredicted RBP18.01■□□□□ 0.47
CLDN4-201ENST00000340958 SP7Q8TDD2 431 aaPredicted RBP18.01■□□□□ 0.47
CLDN4-201ENST00000340958 PGAP3Q96FM1 320 aaPredicted RBP18.01■□□□□ 0.47
CLDN4-201ENST00000340958 TCF25Q9BQ70 676 aa18.01■□□□□ 0.47
CLDN4-201ENST00000340958 ZBP1Q9H171 429 aa18.01■□□□□ 0.47
CLDN4-201ENST00000340958 CERS4Q9HA82 394 aa18.01■□□□□ 0.47
CLDN4-201ENST00000340958 ALG13Q9NP73 1137 aaKnown RBP18.01■□□□□ 0.47
CLDN4-201ENST00000340958 FNIP2Q9P278 1114 aa18.01■□□□□ 0.47
CLDN4-201ENST00000340958 SFMBT1Q9UHJ3 866 aa18.01■□□□□ 0.47
CLDN4-201ENST00000340958 NUDT5Q9UKK9 219 aa18.01■□□□□ 0.47
CLDN4-201ENST00000340958 KIAA1671Q9BY89 1806 aa18.01■□□□□ 0.47
CLDN4-201ENST00000340958 FAM187AA6NFU0 413 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 APOL1O14791 398 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 TEX28O15482 410 aa18■□□□□ 0.47
CLDN4-201ENST00000340958 CREB3O43889 395 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms