RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 CCDC121Q6ZUS5 278 aa12.18□□□□□ -0.46
C2orf88-201ENST00000340623 MICALCLQ6ZW33 695 aa12.18□□□□□ -0.46
C2orf88-201ENST00000340623 C3orf58Q8NDZ4 430 aa12.18□□□□□ -0.46
C2orf88-201ENST00000340623 PDCD6IPQ8WUM4 868 aaKnown RBP12.18□□□□□ -0.46
C2orf88-201ENST00000340623 EXOC4Q96A65 974 aa12.18□□□□□ -0.46
C2orf88-201ENST00000340623 AGAP3Q96P47 875 aa12.18□□□□□ -0.46
C2orf88-201ENST00000340623 ELAC1Q9H777 363 aaKnown RBP12.18□□□□□ -0.46
C2orf88-201ENST00000340623 VRTNQ9H8Y1 702 aa12.18□□□□□ -0.46
C2orf88-201ENST00000340623 CRTAC1Q9NQ79 661 aa12.18□□□□□ -0.46
C2orf88-201ENST00000340623 SAMD15Q9P1V8 674 aa12.18□□□□□ -0.46
C2orf88-201ENST00000340623 POC1B-GALNT4F8VUJ3 575 aa12.18□□□□□ -0.46
C2orf88-201ENST00000340623 PPP1R12AO14974 1030 aaPredicted RBP12.18□□□□□ -0.46
C2orf88-201ENST00000340623 MDM4O15151 490 aa12.18□□□□□ -0.46
C2orf88-201ENST00000340623 CYBBP04839 570 aa12.18□□□□□ -0.46
C2orf88-201ENST00000340623 GLI1P08151 1106 aa12.18□□□□□ -0.46
C2orf88-201ENST00000340623 CSH1P0DML2 217 aa12.18□□□□□ -0.46
C2orf88-201ENST00000340623 CSH2P0DML3 217 aa12.18□□□□□ -0.46
C2orf88-201ENST00000340623 RARGP13631 454 aa12.18□□□□□ -0.46
C2orf88-201ENST00000340623 MBTPS1Q14703 1052 aa12.18□□□□□ -0.46
C2orf88-201ENST00000340623 IL31Q6EBC2 164 aa12.18□□□□□ -0.46
C2orf88-201ENST00000340623 CLEC20AQ6ZU45 233 aa12.18□□□□□ -0.46
C2orf88-201ENST00000340623 KLC2Q9H0B6 622 aa12.18□□□□□ -0.46
C2orf88-201ENST00000340623 PTPRFP10586 1907 aa12.18□□□□□ -0.46
C2orf88-201ENST00000340623 MYBL2P10244 700 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 KRT15P19012 456 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 OTUD4Q01804 1114 aaKnown RBP12.17□□□□□ -0.46
C2orf88-201ENST00000340623 GUCY1A3Q02108 690 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 CCDC38Q502W7 563 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 CCDC149Q6ZUS6 474 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 TFAP2DQ7Z6R9 452 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 CPNE8Q86YQ8 564 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 ACTL9Q8TC94 416 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 CCHCR1Q8TD31 782 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 SERPINB11Q96P15 392 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 NDC80O14777 642 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 AMPD1P23109 780 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 MATKP42679 507 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 IFT88Q13099 833 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 ACCSLQ4AC99 568 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 FAM43BQ6ZT52 329 aaPredicted RBP12.17□□□□□ -0.46
C2orf88-201ENST00000340623 KDELC2Q7Z4H8 507 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 ALG3Q92685 438 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 THOC1Q96FV9 657 aaKnown RBP12.17□□□□□ -0.46
C2orf88-201ENST00000340623 DDX50Q9BQ39 737 aaKnown RBP12.17□□□□□ -0.46
C2orf88-201ENST00000340623 CATSPERBQ9H7T0 1116 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 GMIPQ9P107 970 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 A0A1W2PQH9 124 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 MSI1O43347 362 aaKnown RBP12.17□□□□□ -0.46
C2orf88-201ENST00000340623 FAM189A1O60320 539 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 TLR5O60602 858 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 STAU1O95793 577 aaKnown RBP12.17□□□□□ -0.46
C2orf88-201ENST00000340623 MAGEA9P43362 315 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 ZKSCAN8Q15776 578 aaPredicted RBP12.17□□□□□ -0.46
C2orf88-201ENST00000340623 GLE1Q53GS7 698 aaKnown RBP12.17□□□□□ -0.46
C2orf88-201ENST00000340623 FAM26DQ5JW98 314 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 RNF219Q5W0B1 726 aaPredicted RBP12.17□□□□□ -0.46
C2orf88-201ENST00000340623 RTN4RL1Q86UN2 441 aaPredicted RBP12.17□□□□□ -0.46
C2orf88-201ENST00000340623 PDIK1LQ8N165 341 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 ATPAF2Q8N5M1 289 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 FAM71DQ8N9W8 422 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 IGSF21Q96ID5 467 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 CELF6Q96J87 481 aaKnown RBP12.17□□□□□ -0.46
C2orf88-201ENST00000340623 TMEM175Q9BSA9 504 aa12.17□□□□□ -0.46
C2orf88-201ENST00000340623 SNRNP25Q9BV90 132 aaKnown RBP12.17□□□□□ -0.46
C2orf88-201ENST00000340623 IQCGQ9H095 443 aaKnown RBP12.17□□□□□ -0.46
C2orf88-201ENST00000340623 LOC285556D6RIA3 1793 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 F5H5T6 163 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 PRLRP16471 622 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 MTMR3Q13615 1198 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 DSC3Q14574 896 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 PDK2Q15119 407 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 TRADDQ15628 312 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 IZUMO3Q5VZ72 239 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 EMBQ6PCB8 327 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 YAF2Q8IY57 180 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 MUC3BQ9H195 1237 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 FAM124BQ9H5Z6 455 aaPredicted RBP12.16□□□□□ -0.46
C2orf88-201ENST00000340623 TLE6Q9H808 572 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 RRN3Q9NYV6 651 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 DPP7Q9UHL4 492 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 YJEFN3A6XGL0 299 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 E7ENQ6 273 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 TSPAN3O60637 253 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 FGF18O76093 207 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 MX2P20592 715 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 ATP5C1P36542 298 aaKnown RBP12.16□□□□□ -0.46
C2orf88-201ENST00000340623 SEPT6Q14141 434 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 SMAD1Q15797 465 aaKnown RBP12.16□□□□□ -0.46
C2orf88-201ENST00000340623 HECTD3Q5T447 861 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 JAMLQ86YT9 394 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 EGFL6Q8IUX8 553 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 DDX1Q92499 740 aaKnown RBP12.16□□□□□ -0.46
C2orf88-201ENST00000340623 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.16□□□□□ -0.46
C2orf88-201ENST00000340623 SAE1Q9UBE0 346 aaPredicted RBP12.16□□□□□ -0.46
C2orf88-201ENST00000340623 GOLGA8KD6RF30 607 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 XYLBO75191 536 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 HDCP19113 662 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 NR1D1P20393 614 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 GABRR2P28476 465 aa12.16□□□□□ -0.46
C2orf88-201ENST00000340623 WDR5P61964 334 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms