RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 RSPH3Q86UC2 560 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 BANPQ8N9N5 519 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 PCDH19Q8TAB3 1148 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 LRRC37BQ96QE4 947 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 TSEN34Q9BSV6 310 aaKnown RBP16.93■□□□□ 0.3
LITAF-201ENST00000339430 EIF2AQ9BY44 585 aaKnown RBP16.93■□□□□ 0.3
LITAF-201ENST00000339430 DPEP3Q9H4B8 488 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 L3MBTL1Q9Y468 752 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 A0A1W2PQ45 241 aaPredicted RBP16.93■□□□□ 0.3
LITAF-201ENST00000339430 A0A1W2PQY0 241 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 PAPSS1O43252 624 aaPredicted RBP16.93■□□□□ 0.3
LITAF-201ENST00000339430 GABBR2O75899 941 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 UNC5CO95185 931 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 ZBED1O96006 694 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 MT-ND3P03897 115 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 CCDC15Q0P6D6 951 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 KYAT1Q16773 422 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 PREPLQ4J6C6 727 aaPredicted RBP16.93■□□□□ 0.3
LITAF-201ENST00000339430 MAP7D3Q8IWC1 876 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 OR6B3Q8NGW1 331 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 C10orf82Q8WW14 230 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 KHSRPQ92945 711 aaKnown RBP eCLIP16.93■□□□□ 0.3
LITAF-201ENST00000339430 SERAC1Q96JX3 654 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 APOL6Q9BWW8 343 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 HAO1Q9UJM8 370 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 KIAA1257Q9ULG3 409 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 CDY2AQ9Y6F7 541 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 FRMPD3Q5JV73 1810 aa16.93■□□□□ 0.3
LITAF-201ENST00000339430 M0QZ92 97 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 INHBAP08476 426 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 CCNB1P14635 433 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 SLC8A1P32418 973 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 GRM5P41594 1212 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 SLC6A3Q01959 620 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 CCDC110Q8TBZ0 833 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 PTPRN2Q92932 1015 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 DEFB118Q96PH6 123 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 SSU72Q9NP77 194 aaKnown RBP16.92■□□□□ 0.3
LITAF-201ENST00000339430 DCTN4Q9UJW0 460 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 NOD1Q9Y239 953 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 SMAPO00193 183 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 LPXNO60711 386 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 APRTP07741 180 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 THPOP40225 353 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 PCBP1Q15365 356 aaKnown RBP eCLIP16.92■□□□□ 0.3
LITAF-201ENST00000339430 BOLA3Q53S33 107 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 ZNF449Q6P9G9 518 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 CTAGE3PQ8IX95 158 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 MAGEC3Q8TD91 643 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 AGAP11Q8TF27 550 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 PAK6Q9NQU5 681 aaPredicted RBP16.92■□□□□ 0.3
LITAF-201ENST00000339430 STARD7Q9NQZ5 370 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 PAK5Q9P286 719 aa16.92■□□□□ 0.3
LITAF-201ENST00000339430 PIN4Q9Y237 131 aaKnown RBP16.92■□□□□ 0.3
LITAF-201ENST00000339430 CHADO15335 359 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 STAU1O95793 577 aaKnown RBP16.91■□□□□ 0.3
LITAF-201ENST00000339430 CHRNA1P02708 482 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 PDGFRBP09619 1106 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 PYGBP11216 843 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 ADORA2BP29275 332 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 HDAC4P56524 1084 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 YWHAZP63104 245 aaKnown RBP16.91■□□□□ 0.3
LITAF-201ENST00000339430 PDK2Q15119 407 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 PKDCCQ504Y2 493 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 SMYD5Q6GMV2 418 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 NOTUMQ6P988 496 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 CCDC91Q7Z6B0 441 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 ZNF276Q8N554 614 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 PPM1NQ8N819 430 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 SLC35F5Q8WV83 523 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 TRIM56Q9BRZ2 755 aaKnown RBP16.91■□□□□ 0.3
LITAF-201ENST00000339430 RNF208Q9H0X6 261 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 HESX1Q9UBX0 185 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.91■□□□□ 0.3
LITAF-201ENST00000339430 IQANK1A0A1B0GTG1 560 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 CCDC130P13994 396 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 RIPK1Q13546 671 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 WLSQ5T9L3 541 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 SLC27A1Q6PCB7 646 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 SLC44A1Q8WWI5 657 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 TTC17Q96AE7 1141 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 STAMBPL1Q96FJ0 436 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 FAM111AQ96PZ2 611 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 SLC4A5Q9BY07 1137 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 TXLNGQ9NUQ3 528 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 ETNK2Q9NVF9 386 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 TRPV2Q9Y5S1 764 aa16.91■□□□□ 0.3
LITAF-201ENST00000339430 A8MXQ7 604 aa16.9■□□□□ 0.3
LITAF-201ENST00000339430 DPYSL4O14531 572 aa16.9■□□□□ 0.3
LITAF-201ENST00000339430 CCL5P13501 91 aa16.9■□□□□ 0.3
LITAF-201ENST00000339430 LCP1P13796 627 aa16.9■□□□□ 0.3
LITAF-201ENST00000339430 EZRP15311 586 aaKnown RBP16.9■□□□□ 0.3
LITAF-201ENST00000339430 TGM2P21980 687 aa16.9■□□□□ 0.3
LITAF-201ENST00000339430 AKAP5P24588 427 aa16.9■□□□□ 0.3
LITAF-201ENST00000339430 ALDH3A1P30838 453 aa16.9■□□□□ 0.3
LITAF-201ENST00000339430 PLEKHG4Q58EX7 1191 aa16.9■□□□□ 0.3
LITAF-201ENST00000339430 LRRC6Q86X45 466 aa16.9■□□□□ 0.3
LITAF-201ENST00000339430 RFWD2Q8NHY2 731 aa16.9■□□□□ 0.3
LITAF-201ENST00000339430 TRPV6Q9H1D0 765 aa16.9■□□□□ 0.3
LITAF-201ENST00000339430 DHX35Q9H5Z1 703 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms