RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 RNF14Q9UBS8 474 aa15.13■□□□□ 0.01
NIPAL3-202ENST00000339255 TLR6Q9Y2C9 796 aa15.13■□□□□ 0.01
NIPAL3-202ENST00000339255 HELZP42694 1942 aaKnown RBP15.13■□□□□ 0.01
NIPAL3-202ENST00000339255 C2orf16Q68DN1 1984 aa15.13■□□□□ 0.01
NIPAL3-202ENST00000339255 RFXAPO00287 272 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 CCL16O15467 120 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 RFPL2O75678 378 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 ATP5C1P36542 298 aaKnown RBP15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 MARCKSL1P49006 195 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 CXCR3P49682 368 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 DNA2P51530 1060 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 COPS2P61201 443 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 PITX1P78337 314 aaPredicted RBP15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 SCAPQ12770 1279 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 PPP2R5DQ14738 602 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 ARL13BQ3SXY8 428 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 BRMS1LQ5PSV4 323 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 SCYL2Q6P3W7 929 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 TMEM184AQ6ZMB5 413 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 TMC8Q8IU68 726 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 EFHBQ8N7U6 833 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 MRPS31Q92665 395 aaKnown RBP15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 ADAM33Q9BZ11 813 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 NACA2Q9H009 215 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 ZNF334Q9HCZ1 680 aaPredicted RBP15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 RRAGDQ9NQL2 400 aaPredicted RBP15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 MARCH2Q9P0N8 246 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 PCSK1NQ9UHG2 260 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 ZMYM5Q9UJ78 669 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 DNMT3LQ9UJW3 386 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 CDC23Q9UJX2 597 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 NOTCH4Q99466 2003 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 CLUHO75153 1309 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 SOBPA7XYQ1 873 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 TADA3O75528 432 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 ZRANB2O95218 330 aaKnown RBP eCLIP15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 OAS1P00973 400 aaKnown RBP15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 F11P03951 625 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 TCF4P15884 667 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 GABRR2P28476 465 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 CCR1P32246 355 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 RING1Q06587 406 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 EIF4EBP2Q13542 120 aaPredicted RBP15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 WHAMMP3Q1A5X7 153 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 ZFYVE27Q5T4F4 411 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 ERMARDQ5T6L9 678 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 SEL1L2Q5TEA6 688 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 CYP4V2Q6ZWL3 525 aaPredicted RBP15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 TMEM150AQ86TG1 271 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 VSIG1Q86XK7 387 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 RCOR2Q8IZ40 523 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 ADAM32Q8TC27 787 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 NAP1L3Q99457 506 aaPredicted RBP15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 CORO1BQ9BR76 489 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 LRRC3Q9BY71 257 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 ZWILCHQ9H900 591 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 WDR6Q9NNW5 1121 aaKnown RBP15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 CALCOCO1Q9P1Z2 691 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 HBS1LQ9Y450 684 aaKnown RBP15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 MRFAP1Q9Y605 127 aa15.12■□□□□ 0.01
NIPAL3-202ENST00000339255 SYNJ2BP-COX16A0A087WUM0 186 aa15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 KRT1P04264 644 aa15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 RARAP10276 462 aa15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 POU3F3P20264 500 aaPredicted RBP15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 DDX6P26196 483 aaKnown RBP eCLIP15.11■□□□□ 0.015e-6■■■■■ 46.6
NIPAL3-202ENST00000339255 IL1R2P27930 398 aa15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 GJC1P36383 396 aa15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 PDK2Q15119 407 aa15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 TRIP4Q15650 581 aaPredicted RBP15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 EFHC2Q5JST6 749 aa15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 ACBD5Q5T8D3 534 aaPredicted RBP15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 FAM131BQ86XD5 332 aa15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 MAP7D3Q8IWC1 876 aa15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 RNF34Q969K3 372 aa15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 PEBP4Q96S96 227 aa15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 PSMB7Q99436 277 aa15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 SNRNP25Q9BV90 132 aaKnown RBP15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 PRDM12Q9H4Q4 367 aa15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 WDCPQ9H6R7 721 aa15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 CCSER2Q9H7U1 834 aa15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 COX16Q9P0S2 106 aa15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 TTC7AQ9ULT0 858 aaPredicted RBP15.11■□□□□ 0.01
NIPAL3-202ENST00000339255 BRWD1Q9NSI6 2320 aa15.1■□□□□ 0.01
NIPAL3-202ENST00000339255 CCDC195A0A1B0GUA6 201 aa15.1■□□□□ 0.01
NIPAL3-202ENST00000339255 ZNF487B1APH4 448 aa15.1■□□□□ 0.01
NIPAL3-202ENST00000339255 RHOP08100 348 aa15.1■□□□□ 0.01
NIPAL3-202ENST00000339255 HOXB8P17481 243 aaPredicted RBP15.1■□□□□ 0.01
NIPAL3-202ENST00000339255 CXCR5P32302 372 aa15.1■□□□□ 0.01
NIPAL3-202ENST00000339255 ZNF135P52742 658 aaPredicted RBP15.1■□□□□ 0.01
NIPAL3-202ENST00000339255 EFEMP1Q12805 493 aa15.1■□□□□ 0.01
NIPAL3-202ENST00000339255 DPYSL2Q16555 572 aa15.1■□□□□ 0.01
NIPAL3-202ENST00000339255 SMTNL2Q2TAL5 461 aa15.1■□□□□ 0.01
NIPAL3-202ENST00000339255 TCEAL5Q5H9L2 206 aa15.1■□□□□ 0.01
NIPAL3-202ENST00000339255 ZNF697Q5TEC3 545 aa15.1■□□□□ 0.01
NIPAL3-202ENST00000339255 CCDC181Q5TID7 509 aa15.1■□□□□ 0.01
NIPAL3-202ENST00000339255 DCAF12L1Q5VU92 463 aa15.1■□□□□ 0.01
NIPAL3-202ENST00000339255 NUGGCQ68CJ6 796 aa15.1■□□□□ 0.01
NIPAL3-202ENST00000339255 GAREM2Q75VX8 874 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms