RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 SCAMP3O14828 347 aaKnown RBP15.47■□□□□ 0.07
C9orf47-201ENST00000334490 ANGPT2O15123 496 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 SELPP16109 830 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 HDCP19113 662 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 PPM1AP35813 382 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 BRCC3P46736 316 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 POU4F1Q01851 419 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 CRHR2Q13324 411 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 TERF2Q15554 542 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 LVRNQ6Q4G3 990 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 IARS2Q9NSE4 1012 aaKnown RBP15.47■□□□□ 0.07
C9orf47-201ENST00000334490 WHRNQ9P202 907 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 PADI3Q9ULW8 664 aa15.47■□□□□ 0.07
C9orf47-201ENST00000334490 DRG1Q9Y295 367 aaKnown RBP15.47■□□□□ 0.07
C9orf47-201ENST00000334490 O00370 1275 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 ADH1AP07327 375 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 PYGMP11217 842 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 EEF1B2P24534 225 aaKnown RBP15.46■□□□□ 0.07
C9orf47-201ENST00000334490 ICAM3P32942 547 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 HSD17B3P37058 310 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 ACAP1Q15027 740 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 HECTD3Q5T447 861 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 AGBL2Q5U5Z8 902 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 ARMC2Q8NEN0 867 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 C18orf25Q96B23 403 aaPredicted RBP15.46■□□□□ 0.07
C9orf47-201ENST00000334490 CORO1BQ9BR76 489 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 NPHS2Q9NP85 383 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 WWOXQ9NZC7 414 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 SLC27A5Q9Y2P5 690 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 MAP3K13O43283 966 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 HDAC4P56524 1084 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 TUSC3Q13454 348 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 CUL3Q13618 768 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 PSMD5Q16401 504 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 FAM161BQ96MY7 647 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 UBE2OQ9C0C9 1292 aaKnown RBP15.46■□□□□ 0.07
C9orf47-201ENST00000334490 TBC1D13Q9NVG8 400 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 CAPN15O75808 1086 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 C15orf59Q2T9L4 293 aaPredicted RBP15.46■□□□□ 0.07
C9orf47-201ENST00000334490 AGAP9Q5VTM2 703 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 C16orf59Q7L2K0 433 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 OOSP2Q86WS3 158 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 LRRC52Q8N7C0 313 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 MAF1Q9H063 256 aa15.46■□□□□ 0.07
C9orf47-201ENST00000334490 MRPS23Q9Y3D9 190 aaKnown RBP15.46■□□□□ 0.07
C9orf47-201ENST00000334490 A0A0B4J269 797 aa15.46■□□□□ 0.06
C9orf47-201ENST00000334490 SPTLC1O15269 473 aa15.46■□□□□ 0.06
C9orf47-201ENST00000334490 MEFVO15553 781 aaPredicted RBP15.46■□□□□ 0.06
C9orf47-201ENST00000334490 POU6F1Q14863 301 aa15.46■□□□□ 0.06
C9orf47-201ENST00000334490 BMT2Q1RMZ1 405 aa15.46■□□□□ 0.06
C9orf47-201ENST00000334490 ZC3H12AQ5D1E8 599 aaKnown RBP15.46■□□□□ 0.06
C9orf47-201ENST00000334490 HTR3CQ8WXA8 447 aa15.46■□□□□ 0.06
C9orf47-201ENST00000334490 MYLPFQ96A32 169 aa15.46■□□□□ 0.06
C9orf47-201ENST00000334490 ASAH2Q9NR71 780 aa15.46■□□□□ 0.06
C9orf47-201ENST00000334490 PLIN4Q96Q06 1357 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 TIMM44O43615 452 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 CSH1P0DML2 217 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 CSH2P0DML3 217 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 SPDYE7PQ495Y7 208 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 CACUL1Q86Y37 369 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 ANKRD52Q8NB46 1076 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 PCDH9Q9HC56 1237 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 DMGDHQ9UI17 866 aaKnown RBP15.45■□□□□ 0.06
C9orf47-201ENST00000334490 PCDHA3Q9Y5H8 950 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 TRIM16O95361 564 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 PAX3P23760 479 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 MZF1P28698 734 aaPredicted RBP15.45■□□□□ 0.06
C9orf47-201ENST00000334490 ABCE1P61221 599 aaKnown RBP15.45■□□□□ 0.06
C9orf47-201ENST00000334490 KDSRQ06136 332 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 FAM71AQ8IYT1 594 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 SHC3Q92529 594 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 IKZF4Q9H2S9 585 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 NDE1Q9NXR1 346 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 DDX20Q9UHI6 824 aaKnown RBP15.45■□□□□ 0.06
C9orf47-201ENST00000334490 INHAP05111 366 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 PRKCIP41743 596 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 SLC24A5Q71RS6 500 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 LRRC43Q8N309 656 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 E2F7Q96AV8 911 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 ATRNL1Q5VV63 1379 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 RARGP13631 454 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 RFC1P35251 1148 aaPredicted RBP15.45■□□□□ 0.06
C9orf47-201ENST00000334490 KCNT2Q6UVM3 1135 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 NT5DC3Q86UY8 548 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 RFWD2Q8NHY2 731 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 CSGALNACT1Q8TDX6 532 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 TAS2R14Q9NYV8 317 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 OR12D3Q9UGF7 316 aa15.45■□□□□ 0.06
C9orf47-201ENST00000334490 AKAP12Q02952 1782 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 RBAK-RBAKDNI3L0D1 243 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 DDHD2O94830 711 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 GLP2RO95838 553 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 TPH1P17752 444 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 TBX2Q13207 712 aaPredicted RBP15.44■□□□□ 0.06
C9orf47-201ENST00000334490 MIIPQ5JXC2 388 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 PTAR1Q7Z6K3 402 aaPredicted RBP15.44■□□□□ 0.06
C9orf47-201ENST00000334490 IFNL1Q8IU54 200 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 SERPINB12Q96P63 405 aa15.44■□□□□ 0.06
C9orf47-201ENST00000334490 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.44■□□□□ 0.06
C9orf47-201ENST00000334490 GGT7Q9UJ14 662 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms