RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 DDHD2O94830 711 aa17.08■□□□□ 0.33
PDZD8-201ENST00000334464 POLR2LP62875 67 aaKnown RBP17.08■□□□□ 0.33
PDZD8-201ENST00000334464 FMR1Q06787 632 aaKnown RBP eCLIP17.08■□□□□ 0.331e-6■■■■□ 23.1
PDZD8-201ENST00000334464 PLCL1Q15111 1095 aa17.08■□□□□ 0.33
PDZD8-201ENST00000334464 EID3Q8N140 333 aa17.08■□□□□ 0.33
PDZD8-201ENST00000334464 MAPTP10636 758 aaKnown RBP17.08■□□□□ 0.33
PDZD8-201ENST00000334464 HOXB6P17509 224 aaKnown RBP17.08■□□□□ 0.33
PDZD8-201ENST00000334464 BST2Q10589 180 aaKnown RBP17.08■□□□□ 0.33
PDZD8-201ENST00000334464 STK40Q8N2I9 435 aa17.08■□□□□ 0.33
PDZD8-201ENST00000334464 OPLAHO14841 1288 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 DGKIO75912 1065 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 ACADMP11310 421 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 TIMM50Q3ZCQ8 353 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 CDC42EP5Q6NZY7 148 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 GMCL1P1Q8NEA9 526 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 TRIM63Q969Q1 353 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 PACSIN1Q9BY11 444 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 SPRTNQ9H040 489 aaPredicted RBP17.08■□□□□ 0.32
PDZD8-201ENST00000334464 MBL2P11226 248 aaPredicted RBP17.08■□□□□ 0.32
PDZD8-201ENST00000334464 TC2NQ8N9U0 490 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 SLITRK2Q9H156 845 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 DLGAP2Q9P1A6 1054 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 RAD51BO15315 384 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 HNMTP50135 292 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 MYL6P60660 151 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 FAM182BQ5T319 152 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 CASP12Q6UXS9 341 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 ADI1Q9BV57 179 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 ATMINO43313 823 aaPredicted RBP17.08■□□□□ 0.32
PDZD8-201ENST00000334464 UPP2O95045 317 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 SERPINF2P08697 491 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 ZNF24P17028 368 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 FAM180AQ6UWF9 173 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 ZNF34Q8IZ26 560 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 TDRD5Q8NAT2 981 aaKnown RBP17.08■□□□□ 0.32
PDZD8-201ENST00000334464 TMC2Q8TDI7 906 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 PPP1R14AQ96A00 147 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 RNFT2Q96EX2 444 aa17.08■□□□□ 0.32
PDZD8-201ENST00000334464 TARS2Q9BW92 718 aaKnown RBP17.08■□□□□ 0.32
PDZD8-201ENST00000334464 ZNF682O95780 498 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 CKBP12277 381 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 IRAK1P51617 712 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 VPS72Q15906 364 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 GGA3Q9NZ52 723 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 PAX3P23760 479 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 SERPINB5P36952 375 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 RPS6P62753 249 aaKnown RBP17.07■□□□□ 0.32
PDZD8-201ENST00000334464 PRKAA1Q13131 559 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 KRT74Q7RTS7 529 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 RTL3Q8N8U3 475 aaKnown RBP17.07■□□□□ 0.32
PDZD8-201ENST00000334464 WDR36Q8NI36 951 aaKnown RBP17.07■□□□□ 0.32
PDZD8-201ENST00000334464 LMTK2Q8IWU2 1503 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 PIK3C2BO00750 1634 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 GPR75-ASB3A0A0A6YYF3 556 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 TARSP26639 723 aaKnown RBP17.07■□□□□ 0.32
PDZD8-201ENST00000334464 PON1P27169 355 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 ZC2HC1CQ53FD0 456 aaPredicted RBP17.07■□□□□ 0.32
PDZD8-201ENST00000334464 UBE2E3Q969T4 207 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 PTPAQ15257 358 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 CAAP1Q9H8G2 361 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 PCDH9Q9HC56 1237 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 MYH1P12882 1939 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 MYH4Q9Y623 1939 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 ERN1O75460 977 aaKnown RBP17.07■□□□□ 0.32
PDZD8-201ENST00000334464 MSH3P20585 1137 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 NFKBIZQ9BYH8 718 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 PHTF1Q9UMS5 762 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 CYB561D2O14569 222 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 CCR1P32246 355 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 CORO7P57737 925 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 LZTR1Q8N653 840 aa17.07■□□□□ 0.32
PDZD8-201ENST00000334464 OXCT2Q9BYC2 517 aaPredicted RBP17.07■□□□□ 0.32
PDZD8-201ENST00000334464 WWP2O00308 870 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 CES2O00748 559 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 MGAT5Q09328 741 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 STX4Q12846 297 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 COX10Q12887 443 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 PCBP1Q15365 356 aaKnown RBP eCLIP17.06■□□□□ 0.324e-6■■■■□ 20.1
PDZD8-201ENST00000334464 TMEM132CQ8N3T6 1108 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 CHORDC1Q9UHD1 332 aaPredicted RBP17.06■□□□□ 0.32
PDZD8-201ENST00000334464 RUVBL2Q9Y230 463 aaKnown RBP17.06■□□□□ 0.32
PDZD8-201ENST00000334464 ATP6V1B1P15313 513 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 TMEM62Q0P6H9 643 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 CRYMQ14894 314 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 SPANXN2Q5MJ10 180 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 DNERQ8NFT8 737 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 ZIM3Q96PE6 472 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 RXFP1Q9HBX9 757 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.06■□□□□ 0.32
PDZD8-201ENST00000334464 SH3BP4Q9P0V3 963 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 TRHDEQ9UKU6 1024 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 BIRC5O15392 142 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 MTSS1LQ765P7 747 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 MTMR12Q9C0I1 747 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 SLC39A8Q9C0K1 460 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 ACTR8Q9H981 624 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 UXTQ9UBK9 157 aaPredicted RBP17.06■□□□□ 0.32
PDZD8-201ENST00000334464 AP4E1Q9UPM8 1137 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 CORO2BQ9UQ03 480 aa17.06■□□□□ 0.32
PDZD8-201ENST00000334464 CLPTM1O96005 669 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms