RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 KRT76Q01546 638 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 MTERF2Q49AM1 385 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 LRRN4Q8WUT4 740 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 JADE3Q92613 823 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 CNBD2Q96M20 576 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 TEPSINQ96N21 525 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 TARS2Q9BW92 718 aaKnown RBP14.19□□□□□ -0.14
SYNE3-201ENST00000334258 FRMD8P1Q9BZ68 369 aaPredicted RBP14.19□□□□□ -0.14
SYNE3-201ENST00000334258 TJP2Q9UDY2 1190 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 PCDHA10Q9Y5I2 948 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 ASNSP08243 561 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 DESP17661 470 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 SFNP31947 248 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 TBL3Q12788 808 aaKnown RBP14.19□□□□□ -0.14
SYNE3-201ENST00000334258 TEX44Q53QW1 395 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 HSP90AA5PQ58FG0 334 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 MCPH1Q8NEM0 835 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 LZTS1Q9Y250 596 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 K7ERI5 159 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 ITM2AO43736 263 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 SIN3BO75182 1162 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 FDFT1P37268 417 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 CDH6P55285 790 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 FBXL19Q6PCT2 694 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 DPH6Q7L8W6 267 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 MIPOL1Q8TD10 442 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 DEPDC1BQ8WUY9 529 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 TMEM143Q96AN5 459 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 RMDN3Q96TC7 470 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 C17orf75Q9HAS0 396 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 CISHQ9NSE2 258 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 PTTG2Q9NZH5 202 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 SORCS3Q9UPU3 1222 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 TTLL3Q9Y4R7 772 aa14.19□□□□□ -0.14
SYNE3-201ENST00000334258 MYH9P35579 1960 aaKnown RBP14.19□□□□□ -0.14
SYNE3-201ENST00000334258 LSM8O95777 96 aaKnown RBP14.18□□□□□ -0.14
SYNE3-201ENST00000334258 CST3P01034 146 aaPredicted RBP14.18□□□□□ -0.14
SYNE3-201ENST00000334258 CSH1P0DML2 217 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 CSH2P0DML3 217 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 ALDH1A3P47895 512 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 GJA8P48165 433 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 HSD17B4P51659 736 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 YWHAZP63104 245 aaKnown RBP14.18□□□□□ -0.14
SYNE3-201ENST00000334258 SLC25A11Q02978 314 aaKnown RBP14.18□□□□□ -0.14
SYNE3-201ENST00000334258 ITGA9Q13797 1035 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 TMEM259Q4ZIN3 620 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 TAS1R3Q7RTX0 852 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 MCF2L2Q86YR7 1114 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 CCDC33Q8N5R6 958 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 DEPTORQ8TB45 409 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 SNRNP27Q8WVK2 155 aaKnown RBP14.18□□□□□ -0.14
SYNE3-201ENST00000334258 CMTM5Q96DZ9 223 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 LRGUKQ96M69 825 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 EFR3BQ9Y2G0 817 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 RIPK3Q9Y572 518 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 CCNT2O60583 730 aaKnown RBP14.18□□□□□ -0.14
SYNE3-201ENST00000334258 SLC1A6P48664 564 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 XIAPP98170 497 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 SFSWAPQ12872 951 aaKnown RBP14.18□□□□□ -0.14
SYNE3-201ENST00000334258 TLR1Q15399 786 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 VWA5B1Q5TIE3 1220 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 CASC4Q6P4E1 433 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 TRMT10BQ6PF06 316 aaKnown RBP14.18□□□□□ -0.14
SYNE3-201ENST00000334258 UGT2A3Q6UWM9 527 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 NIPA1Q7RTP0 329 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 KIAA0319LQ8IZA0 1049 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 PRPF31Q8WWY3 499 aaKnown RBP14.18□□□□□ -0.14
SYNE3-201ENST00000334258 ATP6V0A1Q93050 837 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 FEM1BQ9UK73 627 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 ZNF510Q9Y2H8 683 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 ZNF536O15090 1300 aa14.18□□□□□ -0.14
SYNE3-201ENST00000334258 DCXO43602 365 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 DGAT1O75907 488 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 MIPP30301 263 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 MYL6P60660 151 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 TRPC3Q13507 836 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 GRM2Q14416 872 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 NADK2Q4G0N4 442 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 ARHGEF16Q5VV41 709 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 KLHDC10Q6PID8 442 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 TMC7Q7Z402 723 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 ARFGAP1Q8N6T3 406 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 SYTL5Q8TDW5 730 aaPredicted RBP14.17□□□□□ -0.14
SYNE3-201ENST00000334258 TFAP2BQ92481 460 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 PRPF18Q99633 342 aaKnown RBP14.17□□□□□ -0.14
SYNE3-201ENST00000334258 SMYD2Q9NRG4 433 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 PNPOQ9NVS9 261 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 NXF1Q9UBU9 619 aaKnown RBP14.17□□□□□ -0.14
SYNE3-201ENST00000334258 APOEP02649 317 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 HNRNPCP07910 306 aaKnown RBP eCLIP14.17□□□□□ -0.14
SYNE3-201ENST00000334258 ATXN3P54252 364 aaPredicted RBP14.17□□□□□ -0.14
SYNE3-201ENST00000334258 RPS6P62753 249 aaKnown RBP14.17□□□□□ -0.14
SYNE3-201ENST00000334258 CYLC2Q14093 348 aaPredicted RBP14.17□□□□□ -0.14
SYNE3-201ENST00000334258 GALNT4Q8N4A0 578 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 WDTC1Q8N5D0 677 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 ATG4CQ96DT6 458 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 KLC2Q9H0B6 622 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 FBXO40Q9UH90 709 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 TBC1D30Q9Y2I9 924 aa14.17□□□□□ -0.14
SYNE3-201ENST00000334258 E2F8A0AVK6 867 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms