RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 PGBD2Q6P3X8 592 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 APOA5Q6Q788 366 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 ADSSL1Q8N142 457 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 SGK3Q96BR1 496 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 MYRFLQ96LU7 910 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 SETDB2Q96T68 719 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 MAT2BQ9NZL9 334 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 PTPN22Q9Y2R2 807 aa6.23□□□□□ -1.41
CDC42BPA-201ENST00000334218 SPATA31A6Q5VVP1 1343 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 FRMPD2Q68DX3 1309 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 MYL4P12829 197 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 LSP1P33241 339 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 NT5C2P49902 561 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 RNF4P78317 190 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 AGAP9Q5VTM2 703 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 AFTPHQ6ULP2 937 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 SETD9Q8NE22 299 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 TRIM54Q9BYV2 358 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 BRINP2Q9C0B6 783 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 QTRT2Q9H974 415 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 TCF7L2Q9NQB0 619 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 SEMA3GQ9NS98 782 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 UBQLN1Q9UMX0 589 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 AP4E1Q9UPM8 1137 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 SMG5Q9UPR3 1016 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 REXO2Q9Y3B8 237 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 KCNE2Q9Y6J6 123 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 ARHGAP31Q2M1Z3 1444 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 MAP3K15Q6ZN16 1313 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZNF335Q9H4Z2 1342 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 K7ERI5 159 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 PEPDP12955 493 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 MAGEB1P43366 347 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 CDH4P55283 916 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 PRMT2P55345 433 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 PTH1RQ03431 593 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 GLO1Q04760 184 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 SLC29A2Q14542 456 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 ATCAYQ86WG3 371 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 RIBC1Q8N443 379 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 PIK3R3Q92569 461 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 MRPL47Q9HD33 250 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 TOR4AQ9NXH8 423 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 KLHL8Q9P2G9 620 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 SH3TC1Q8TE82 1336 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 ITIH2P19823 946 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 OGNP20774 298 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 MYL9P24844 172 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 HNF1BP35680 557 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 C8orf34Q49A92 452 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 TIGD7Q6NT04 549 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 TTC23LQ6PF05 361 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 DOK6Q6PKX4 331 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 MYD88Q99836 296 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 RTFDC1Q9BY42 306 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 RCOR1Q9UKL0 485 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 UGGT1Q9NYU2 1555 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 STK11Q15831 433 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 SCARA3Q6AZY7 606 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 SPOPLQ6IQ16 392 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 PAPD4Q6PIY7 484 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 DNM1P34Q6PK57 102 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 CIR1Q86X95 450 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 LGMNQ99538 433 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 ADGRE3Q9BY15 652 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 PSMD13Q9UNM6 376 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 RGS14O43566 566 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 ATP4AP20648 1035 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 RPA1P27694 616 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 BLMHQ13867 455 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 PTPN21Q16825 1174 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 AMZ1Q400G9 498 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 IZUMO1Q8IYV9 350 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 ELMOD2Q8IZ81 293 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 SLC30A5Q8TAD4 765 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 SAMD11Q96NU1 681 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 CDRT15Q96T59 188 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 EML4Q9HC35 981 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 ANKHQ9HCJ1 492 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 CA5BQ9Y2D0 317 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 FARP1Q9Y4F1 1045 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 SAMM50Q9Y512 469 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZCCHC11Q5TAX3 1644 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 HEATR9A2RTY3 570 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 RRN3P2A6NIE6 340 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 M0R036 132 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 ARFIP2P53365 341 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 ATP2C1P98194 919 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 SLFN12LQ6IEE8 588 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 SWSAP1Q6NVH7 229 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 FAM196AQ6ZSG2 479 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 GALNT15Q8N3T1 639 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 RASGEF1AQ8N9B8 481 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 PPEF1O14829 653 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 ATMINO43313 823 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 MITFO75030 526 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZBTB48P10074 688 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 CDK2P24941 298 aa6.22□□□□□ -1.41
CDC42BPA-201ENST00000334218 GUCY1A2P33402 732 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms