RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 KRT35Q92764 455 aa17.23■□□□□ 0.35
SHOX-201ENST00000334060 PPP2R3CQ969Q6 453 aa17.23■□□□□ 0.35
SHOX-201ENST00000334060 NT5C3BQ969T7 300 aa17.23■□□□□ 0.35
SHOX-201ENST00000334060 RSPRY1Q96DX4 576 aa17.23■□□□□ 0.35
SHOX-201ENST00000334060 TRIM11Q96F44 468 aa17.23■□□□□ 0.35
SHOX-201ENST00000334060 P2RY11Q96G91 374 aa17.23■□□□□ 0.35
SHOX-201ENST00000334060 LRRC3BQ96PB8 259 aa17.23■□□□□ 0.35
SHOX-201ENST00000334060 WDR6Q9NNW5 1121 aaKnown RBP17.23■□□□□ 0.35
SHOX-201ENST00000334060 TRPM5Q9NZQ8 1165 aa17.23■□□□□ 0.35
SHOX-201ENST00000334060 SCINQ9Y6U3 715 aa17.23■□□□□ 0.35
SHOX-201ENST00000334060 ENC1O14682 589 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 MTA2O94776 668 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 TRUB2O95900 331 aaKnown RBP17.22■□□□□ 0.35
SHOX-201ENST00000334060 IRF1P10914 325 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 COMTP21964 271 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 ZNF143P52747 638 aaPredicted RBP17.22■□□□□ 0.35
SHOX-201ENST00000334060 GPR158Q5T848 1215 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 RSRC2Q7L4I2 434 aaKnown RBP17.22■□□□□ 0.35
SHOX-201ENST00000334060 ELMOD1Q8N336 334 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 MYEOVQ96EZ4 313 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 UVRAGQ9P2Y5 699 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 ASB3Q9Y575 518 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 XYLBO75191 536 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 IGLV3-25P01717 112 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 EIF4EBP2Q13542 120 aaPredicted RBP17.22■□□□□ 0.35
SHOX-201ENST00000334060 CA9Q16790 459 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 AADACL2Q6P093 401 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 RHOT2Q8IXI1 618 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 PYROXD2Q8N2H3 581 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 SLC35F6Q8N357 371 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 SMRP1Q8NCR6 262 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 C16orf45Q96MC5 204 aaPredicted RBP17.22■□□□□ 0.35
SHOX-201ENST00000334060 PSMB7Q99436 277 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 ABCC13Q9NSE7 274 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 DDIT4Q9NX09 232 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 ALG6Q9Y672 507 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 A0A0C4DFX4 3053 aa17.22■□□□□ 0.35
SHOX-201ENST00000334060 A0A0A6YYK5 440 aaPredicted RBP17.21■□□□□ 0.35
SHOX-201ENST00000334060 BTNL10A8MVZ5 291 aa17.21■□□□□ 0.35
SHOX-201ENST00000334060 PAPLNO95428 1278 aa17.21■□□□□ 0.35
SHOX-201ENST00000334060 SDC4P31431 198 aa17.21■□□□□ 0.35
SHOX-201ENST00000334060 NOS2P35228 1153 aa17.21■□□□□ 0.35
SHOX-201ENST00000334060 KCTD19Q17RG1 926 aaPredicted RBP17.21■□□□□ 0.35
SHOX-201ENST00000334060 ZC3H12AQ5D1E8 599 aaKnown RBP17.21■□□□□ 0.35
SHOX-201ENST00000334060 SNX30Q5VWJ9 437 aa17.21■□□□□ 0.35
SHOX-201ENST00000334060 DAAM2Q86T65 1068 aa17.21■□□□□ 0.35
SHOX-201ENST00000334060 NPAS3Q8IXF0 933 aa17.21■□□□□ 0.35
SHOX-201ENST00000334060 CMASQ8NFW8 434 aaPredicted RBP17.21■□□□□ 0.35
SHOX-201ENST00000334060 MYADMQ96S97 322 aa17.21■□□□□ 0.35
SHOX-201ENST00000334060 MRPL47Q9HD33 250 aaKnown RBP17.21■□□□□ 0.35
SHOX-201ENST00000334060 DZANK1Q9NVP4 752 aa17.21■□□□□ 0.35
SHOX-201ENST00000334060 ASNSD1Q9NWL6 643 aa17.21■□□□□ 0.35
SHOX-201ENST00000334060 MRPS23Q9Y3D9 190 aaKnown RBP17.21■□□□□ 0.35
SHOX-201ENST00000334060 USP15Q9Y4E8 981 aaPredicted RBP17.21■□□□□ 0.35
SHOX-201ENST00000334060 DOCK8Q8NF50 2099 aa17.21■□□□□ 0.35
SHOX-201ENST00000334060 SLC12A8A0AV02 714 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 MYO1FO00160 1098 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 KRT86O43790 486 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 PROSCO94903 275 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 C1RP00736 705 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 KLKB1P03952 638 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 MIPP30301 263 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 SCNN1AP37088 669 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 GABPB1Q06547 395 aaPredicted RBP17.2■□□□□ 0.34
SHOX-201ENST00000334060 TCEAL1Q15170 157 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 SLC25A52Q3SY17 297 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 ZNF569Q5MCW4 686 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 HECTD3Q5T447 861 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 FGF13Q92913 245 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 SMOC2Q9H3U7 446 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 SLITRK6Q9H5Y7 841 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 UBE2ZQ9H832 354 aaPredicted RBP17.2■□□□□ 0.34
SHOX-201ENST00000334060 FAM204AQ9H8W3 233 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 ZWILCHQ9H900 591 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 CPQQ9Y646 472 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 DPYSL4O14531 572 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 IRAK2O43187 625 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 ZSCAN12O43309 604 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 MOCS2O96007 188 aaPredicted RBP17.2■□□□□ 0.34
SHOX-201ENST00000334060 VIPR2P41587 438 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 SLC25A11Q02978 314 aaKnown RBP17.2■□□□□ 0.34
SHOX-201ENST00000334060 CC2D1AQ6P1N0 951 aaPredicted RBP17.2■□□□□ 0.34
SHOX-201ENST00000334060 SCYL2Q6P3W7 929 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 ZNF662Q6ZS27 426 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 CENPIQ92674 756 aaPredicted RBP17.2■□□□□ 0.34
SHOX-201ENST00000334060 CEP295NLQ96MC4 621 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 CLIC5Q9NZA1 410 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 MARCH2Q9P0N8 246 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 CLUHO75153 1309 aa17.2■□□□□ 0.34
SHOX-201ENST00000334060 GOLGA6L7A0A1B0GV03 622 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 GREM1O60565 184 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 OLFM2O95897 454 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 GLI1P08151 1106 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 CD48P09326 243 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 MBL2P11226 248 aaPredicted RBP17.19■□□□□ 0.34
SHOX-201ENST00000334060 HDCP19113 662 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 PTPN9P43378 593 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 NUMBP49757 651 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 FAM182AQ5T1J6 154 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 ARTNQ5T4W7 220 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms