RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 GOT1P17174 413 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 YWHAGP61981 247 aaKnown RBP eCLIP18.03■□□□□ 0.48
DDX28-201ENST00000332395 MRPS5P82675 430 aaKnown RBP18.03■□□□□ 0.48
DDX28-201ENST00000332395 MTFR1Q15390 333 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 PREPLQ4J6C6 727 aaPredicted RBP18.03■□□□□ 0.48
DDX28-201ENST00000332395 DCAF6Q58WW2 860 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 MDH1BQ5I0G3 518 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 KIAA0319Q5VV43 1072 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 NCBP2-AS2Q69YL0 99 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 CGB2Q6NT52 195 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 CLEC20AQ6ZU45 233 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 PYROXD2Q8N2H3 581 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 KCTD13Q8WZ19 329 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 ZFYVE28Q9HCC9 887 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 ABCF3Q9NUQ8 709 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 GRID1Q9ULK0 1009 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 FZD10Q9ULW2 581 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 USP3Q9Y6I4 520 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 GCATO75600 419 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 TOMM70O94826 608 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 CTSHP09668 335 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 FAM163BP0C2L3 166 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 AMPD1P23109 780 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 CTGFP29279 349 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 SLC1A5Q15758 541 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 NBPF20Q3BBV1 942 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 OTUD1Q5VV17 481 aaPredicted RBP18.03■□□□□ 0.48
DDX28-201ENST00000332395 KCNT2Q6UVM3 1135 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 CXCL17Q6UXB2 119 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 C4orf22Q6V702 233 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 CAND1Q86VP6 1230 aaKnown RBP18.03■□□□□ 0.48
DDX28-201ENST00000332395 CCDC33Q8N5R6 958 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 SENP8Q96LD8 212 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 QKIQ96PU8 341 aaKnown RBP eCLIP18.03■□□□□ 0.48
DDX28-201ENST00000332395 GAD1Q99259 594 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 MED10Q9BTT4 135 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 LRRC4Q9HBW1 653 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 DDX43Q9NXZ2 648 aaKnown RBP18.03■□□□□ 0.48
DDX28-201ENST00000332395 DONSONQ9NYP3 566 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 DTLQ9NZJ0 730 aa18.03■□□□□ 0.48
DDX28-201ENST00000332395 GBP2P32456 591 aaPredicted RBP18.02■□□□□ 0.48
DDX28-201ENST00000332395 ARL4AP40617 200 aa18.02■□□□□ 0.48
DDX28-201ENST00000332395 NDUFV1P49821 464 aa18.02■□□□□ 0.48
DDX28-201ENST00000332395 AFF1P51825 1210 aaKnown RBP18.02■□□□□ 0.48
DDX28-201ENST00000332395 GJA9P57773 515 aa18.02■□□□□ 0.48
DDX28-201ENST00000332395 PITX1P78337 314 aaPredicted RBP18.02■□□□□ 0.48
DDX28-201ENST00000332395 KBTBD12Q3ZCT8 623 aa18.02■□□□□ 0.48
DDX28-201ENST00000332395 GDF6Q6KF10 455 aaPredicted RBP18.02■□□□□ 0.48
DDX28-201ENST00000332395 RGMBQ6NW40 437 aa18.02■□□□□ 0.48
DDX28-201ENST00000332395 VPS52Q8N1B4 723 aa18.02■□□□□ 0.48
DDX28-201ENST00000332395 SIX6OS1Q8N1H7 587 aa18.02■□□□□ 0.48
DDX28-201ENST00000332395 WNT8BQ93098 351 aa18.02■□□□□ 0.48
DDX28-201ENST00000332395 PITPNM3Q9BZ71 974 aa18.02■□□□□ 0.48
DDX28-201ENST00000332395 MCM8Q9UJA3 840 aa18.02■□□□□ 0.48
DDX28-201ENST00000332395 ARL2BPQ9Y2Y0 163 aa18.02■□□□□ 0.48
DDX28-201ENST00000332395 MFHAS1Q9Y4C4 1052 aa18.02■□□□□ 0.48
DDX28-201ENST00000332395 ZWINTO95229 277 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 NOS2P35228 1153 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 CRHR2Q13324 411 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 PDK4Q16654 411 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 RGS9BPQ6ZS82 235 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 FAM47EQ6ZV65 393 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 RSPH3Q86UC2 560 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 SAPCD2Q86UD0 394 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 HACE1Q8IYU2 909 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 SLC44A1Q8WWI5 657 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 LPPQ93052 612 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 NT5C3BQ969T7 300 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 GRAMD1AQ96CP6 724 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 CFAP36Q96G28 342 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 NMRK2Q9NPI5 230 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 CRTAC1Q9NQ79 661 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 KRT82Q9NSB4 513 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 RCOR3Q9P2K3 495 aaPredicted RBP18.01■□□□□ 0.47
DDX28-201ENST00000332395 PRKAG3Q9UGI9 489 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 SLC12A4Q9UP95 1085 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 SCN10AQ9Y5Y9 1956 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 METTL18O95568 372 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 THP07101 528 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 GSTA1P08263 222 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 FAM200BP0CF97 657 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 PSEN1P49768 467 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 CLCNKBP51801 687 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 MAP3K7CLP57077 242 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 DNAJC3Q13217 504 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 PTK7Q13308 1070 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 WLSQ5T9L3 541 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 HHATQ5VTY9 493 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 HEATR6Q6AI08 1181 aaKnown RBP18.01■□□□□ 0.47
DDX28-201ENST00000332395 BNIPLQ7Z465 357 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 PSTKQ8IV42 348 aaKnown RBP18.01■□□□□ 0.47
DDX28-201ENST00000332395 MCUQ8NE86 351 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 SPOCK2Q92563 424 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 OLFM3Q96PB7 478 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 NPY6RQ99463 290 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 SENP6Q9GZR1 1112 aaPredicted RBP18.01■□□□□ 0.47
DDX28-201ENST00000332395 POPDC2Q9HBU9 364 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 PNPLA8Q9NP80 782 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 STAP1Q9ULZ2 295 aa18.01■□□□□ 0.47
DDX28-201ENST00000332395 IKBKGQ9Y6K9 419 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms