RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 YWHAZP63104 245 aaKnown RBP8.15□□□□□ -1.1
VMA21-201ENST00000330374 TRPC3Q13507 836 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 BBS12Q6ZW61 710 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 SESTD1Q86VW0 696 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 PRPF31Q8WWY3 499 aaKnown RBP8.15□□□□□ -1.1
VMA21-201ENST00000330374 TTLL3Q9Y4R7 772 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 PCDHA10Q9Y5I2 948 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 UBIAD1Q9Y5Z9 338 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 TEX264Q9Y6I9 313 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 GOLGA8QA0A0J9YX86 632 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 GOLGA8OA6NCC3 632 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 GOLGA8NF8WBI6 632 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 AIM2O14862 343 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 RFPL1O75677 317 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 CD1EP15812 388 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 PRKCEQ02156 737 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 PGM5Q15124 567 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 DACT2Q5SW24 774 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 LGSNQ5TDP6 509 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 PHTF2Q8N3S3 785 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 STKLD1Q8NE28 680 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 ITFG2Q969R8 447 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 TMEM165Q9HC07 324 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 PICK1Q9NRD5 415 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 POLIQ9UNA4 740 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 DTNAQ9Y4J8 743 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 COL16A1Q07092 1604 aaPredicted RBP8.15□□□□□ -1.1
VMA21-201ENST00000330374 FOCADQ5VW36 1801 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 E7ESA3 106 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 POLRMTO00411 1230 aaKnown RBP8.15□□□□□ -1.1
VMA21-201ENST00000330374 NEMP1O14524 444 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 SERPINA6P08185 405 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 KRT7P08729 469 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 TCN1P20061 433 aaPredicted RBP8.15□□□□□ -1.1
VMA21-201ENST00000330374 RBL1P28749 1068 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 CHN2P52757 468 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 SEC13P55735 322 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 SLC25A11Q02978 314 aaKnown RBP8.15□□□□□ -1.1
VMA21-201ENST00000330374 TBL3Q12788 808 aaKnown RBP8.15□□□□□ -1.1
VMA21-201ENST00000330374 PRKG1Q13976 671 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 C15orf59Q2T9L4 293 aaPredicted RBP8.15□□□□□ -1.1
VMA21-201ENST00000330374 SLC27A3Q5K4L6 730 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 SH2D5Q6ZV89 423 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 SDCCAG8Q86SQ7 713 aaPredicted RBP8.15□□□□□ -1.1
VMA21-201ENST00000330374 TRIM42Q8IWZ5 723 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 HACE1Q8IYU2 909 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 TTC13Q8NBP0 860 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 PPP1R14AQ96A00 147 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 DTNBP1Q96EV8 351 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 C7orf26Q96N11 449 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 PRPF18Q99633 342 aaKnown RBP8.15□□□□□ -1.1
VMA21-201ENST00000330374 RNPEPQ9H4A4 650 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 CDH22Q9UJ99 828 aa8.15□□□□□ -1.1
VMA21-201ENST00000330374 CNTNAP2Q9UHC6 1331 aa8.15□□□□□ -1.11
VMA21-201ENST00000330374 PEX1O43933 1283 aa8.15□□□□□ -1.11
VMA21-201ENST00000330374 SIN3BO75182 1162 aa8.15□□□□□ -1.11
VMA21-201ENST00000330374 KRT38O76015 456 aa8.15□□□□□ -1.11
VMA21-201ENST00000330374 CLPTM1O96005 669 aa8.15□□□□□ -1.11
VMA21-201ENST00000330374 BPGMP07738 259 aa8.15□□□□□ -1.11
VMA21-201ENST00000330374 ITGA2BP08514 1039 aa8.15□□□□□ -1.11
VMA21-201ENST00000330374 TBXAS1P24557 533 aaPredicted RBP8.15□□□□□ -1.11
VMA21-201ENST00000330374 CPOXP36551 454 aa8.15□□□□□ -1.11
VMA21-201ENST00000330374 ABCG1P45844 678 aa8.15□□□□□ -1.11
VMA21-201ENST00000330374 GALK1P51570 392 aa8.15□□□□□ -1.11
VMA21-201ENST00000330374 JAK3P52333 1124 aa8.15□□□□□ -1.11
VMA21-201ENST00000330374 MAP3K10Q02779 954 aa8.15□□□□□ -1.11
VMA21-201ENST00000330374 KRT81Q14533 505 aa8.15□□□□□ -1.11
VMA21-201ENST00000330374 MYBPC3Q14896 1274 aa8.15□□□□□ -1.11
VMA21-201ENST00000330374 CYTH1Q15438 398 aa8.15□□□□□ -1.11
VMA21-201ENST00000330374 CNGA3Q16281 694 aa8.15□□□□□ -1.11
VMA21-201ENST00000330374 N4BP2L1Q5TBK1 243 aaPredicted RBP8.15□□□□□ -1.11
VMA21-201ENST00000330374 PODNQ7Z5L7 613 aa8.15□□□□□ -1.11
VMA21-201ENST00000330374 CCDC60Q8IWA6 550 aaPredicted RBP8.15□□□□□ -1.11
VMA21-201ENST00000330374 PGLYRP2Q96PD5 576 aa8.15□□□□□ -1.11
VMA21-201ENST00000330374 ANKEF1Q9NU02 776 aa8.15□□□□□ -1.11
VMA21-201ENST00000330374 CHCHD3Q9NX63 227 aaKnown RBP8.15□□□□□ -1.11
VMA21-201ENST00000330374 CYTH4Q9UIA0 394 aa8.15□□□□□ -1.11
VMA21-201ENST00000330374 POMPQ9Y244 141 aa8.15□□□□□ -1.11
VMA21-201ENST00000330374 HEMK1Q9Y5R4 338 aaPredicted RBP8.15□□□□□ -1.11
VMA21-201ENST00000330374 MAGEB3O15480 346 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 ZBED1O96006 694 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 SERPINB5P36952 375 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 CAP2P40123 477 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 SLC1A6P48664 564 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 MRPS22P82650 360 aaKnown RBP8.14□□□□□ -1.11
VMA21-201ENST00000330374 TLR1Q15399 786 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 LRRC38Q5VT99 294 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 SAMD3Q8N6K7 520 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 UBA3Q8TBC4 463 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 ADAM32Q8TC27 787 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 CLEC4DQ8WXI8 215 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 ZNF778Q96MU6 729 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 SPC25Q9HBM1 224 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 CSDE1O75534 798 aaKnown RBP8.14□□□□□ -1.11
VMA21-201ENST00000330374 ASLP04424 464 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 EDN1P05305 212 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 ICAM1P05362 532 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 HSD17B4P51659 736 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 TEX44Q53QW1 395 aa8.14□□□□□ -1.11
VMA21-201ENST00000330374 ZC3H12AQ5D1E8 599 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms