RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 PGFP49763 221 aa17.19■□□□□ 0.34
PDLIM1-201ENST00000329399 MESDQ14696 234 aa17.19■□□□□ 0.34
PDLIM1-201ENST00000329399 ERCC6LQ2NKX8 1250 aa17.19■□□□□ 0.34
PDLIM1-201ENST00000329399 MMS22LQ6ZRQ5 1243 aa17.19■□□□□ 0.34
PDLIM1-201ENST00000329399 DNAAF5Q86Y56 855 aa17.19■□□□□ 0.34
PDLIM1-201ENST00000329399 WDTC1Q8N5D0 677 aa17.19■□□□□ 0.34
PDLIM1-201ENST00000329399 MAB21L3Q8N8X9 362 aa17.19■□□□□ 0.34
PDLIM1-201ENST00000329399 IPO4Q8TEX9 1081 aaKnown RBP17.19■□□□□ 0.34
PDLIM1-201ENST00000329399 FNIP1Q8TF40 1166 aa17.19■□□□□ 0.34
PDLIM1-201ENST00000329399 COG1Q8WTW3 980 aa17.19■□□□□ 0.34
PDLIM1-201ENST00000329399 ANKRD7Q92527 254 aa17.19■□□□□ 0.34
PDLIM1-201ENST00000329399 PBXIP1Q96AQ6 731 aa17.19■□□□□ 0.34
PDLIM1-201ENST00000329399 C8orf48Q96LL4 319 aa17.19■□□□□ 0.34
PDLIM1-201ENST00000329399 NCAPGQ9BPX3 1015 aa17.19■□□□□ 0.34
PDLIM1-201ENST00000329399 ZSWIM1Q9BR11 485 aa17.19■□□□□ 0.34
PDLIM1-201ENST00000329399 MED10Q9BTT4 135 aa17.19■□□□□ 0.34
PDLIM1-201ENST00000329399 TRPV4Q9HBA0 871 aa17.19■□□□□ 0.34
PDLIM1-201ENST00000329399 ANAPC7Q9UJX3 599 aa17.19■□□□□ 0.34
PDLIM1-201ENST00000329399 CCL26Q9Y258 94 aa17.19■□□□□ 0.34
PDLIM1-201ENST00000329399 PCDHA3Q9Y5H8 950 aa17.19■□□□□ 0.34
PDLIM1-201ENST00000329399 CCDC188H7C350 402 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 PGRMC1O00264 195 aaKnown RBP17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 TNFRSF10BO14763 440 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 SPOPO43791 374 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 PROSCO94903 275 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 SRFP11831 508 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 COMTP21964 271 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 ADORA2BP29275 332 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 GPD2P43304 727 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 PIGHQ14442 188 aaPredicted RBP17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 DNAJC24Q6P3W2 148 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 MTSS1LQ765P7 747 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 PASD1Q8IV76 773 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 C1orf131Q8NDD1 294 aaKnown RBP17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 SPATA4Q8NEY3 305 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 CD101Q93033 1021 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 ELSPBP1Q96BH3 223 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 TRMT2BQ96GJ1 504 aaKnown RBP17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 ZFP14Q9HCL3 533 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 CA14Q9ULX7 337 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 CACNA1HO95180 2353 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 C2orf78A6NCI8 922 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 TMEM191CA6NGB0 347 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 SHISA7A6NL88 538 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 SIGLEC16A6NMB1 481 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 HEPACAM2A8MVW5 462 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 DDX3YO15523 660 aaKnown RBP17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 AP1G2O75843 785 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 CDC25CP30307 473 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 CTNNA1P35221 906 aaKnown RBP17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 SCNN1AP37088 669 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 ACADSBP45954 432 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 VCPP55072 806 aaKnown RBP17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 SLC8A3P57103 927 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 TEX35Q5T0J7 233 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 PPP1R26Q5T8A7 1209 aaPredicted RBP17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 DENND1BQ6P3S1 775 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 DENND5BQ6ZUT9 1274 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 GPRIN1Q7Z2K8 1008 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 BMP8AQ7Z5Y6 402 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 SIX5Q8N196 739 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 NIPA2Q8N8Q9 360 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 MAIP1Q8WWC4 291 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 CAPZA3Q96KX2 299 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 TASP1Q9H6P5 420 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 SYNCQ9H7C4 482 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 SLC2A4RGQ9NR83 387 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 KRT82Q9NSB4 513 aa17.18■□□□□ 0.34
PDLIM1-201ENST00000329399 DENND4CQ5VZ89 1909 aa17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 TCRBV5S1A1TA0A578 114 aa17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 HHLA1C9JL84 531 aa17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 M0QYV0 167 aa17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 ZNF185O15231 689 aa17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 PSTPIP1O43586 416 aa17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 PI15O43692 258 aa17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 DESP17661 470 aa17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 CETN2P41208 172 aa17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 RWDD2BP57060 319 aa17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 MAP3K7CLP57077 242 aa17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 ZXDBP98169 803 aa17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 IFRD2Q12894 506 aaPredicted RBP17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 PPP1R15BQ5SWA1 713 aa17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 LRRC38Q5VT99 294 aa17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 DCUN1D2Q6PH85 259 aa17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 ANKRD52Q8NB46 1076 aa17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 HNRNPABQ99729 332 aaKnown RBP17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 TTLL2Q9BWV7 592 aa17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 CSNK1G1Q9HCP0 422 aa17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 TSPAN16Q9UKR8 245 aa17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 ZNF638Q14966 1978 aaKnown RBP17.17■□□□□ 0.34
PDLIM1-201ENST00000329399 ANAPC1Q9H1A4 1944 aa17.16■□□□□ 0.34
PDLIM1-201ENST00000329399 TRIM66O15016 1216 aa17.16■□□□□ 0.34
PDLIM1-201ENST00000329399 CEP104O60308 925 aa17.16■□□□□ 0.34
PDLIM1-201ENST00000329399 PEX5P50542 639 aa17.16■□□□□ 0.34
PDLIM1-201ENST00000329399 BCAT1P54687 386 aa17.16■□□□□ 0.34
PDLIM1-201ENST00000329399 TAF10Q12962 218 aa17.16■□□□□ 0.34
PDLIM1-201ENST00000329399 PDCLQ13371 301 aa17.16■□□□□ 0.34
PDLIM1-201ENST00000329399 ELF2Q15723 593 aa17.16■□□□□ 0.34
PDLIM1-201ENST00000329399 PKDCCQ504Y2 493 aa17.16■□□□□ 0.34
PDLIM1-201ENST00000329399 SEL1L2Q5TEA6 688 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms