RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 SSR1P43307 286 aaKnown RBP19.55■□□□□ 0.72
EXOSC3-201ENST00000327304 TNNT3P45378 269 aaPredicted RBP19.55■□□□□ 0.72
EXOSC3-201ENST00000327304 NRIP1P48552 1158 aa19.55■□□□□ 0.72
EXOSC3-201ENST00000327304 TAF10Q12962 218 aa19.55■□□□□ 0.72
EXOSC3-201ENST00000327304 VEPH1Q14D04 833 aa19.55■□□□□ 0.72
EXOSC3-201ENST00000327304 DAB2IPQ5VWQ8 1189 aa19.55■□□□□ 0.72
EXOSC3-201ENST00000327304 DEFB106AQ8N104 65 aa19.55■□□□□ 0.72
EXOSC3-201ENST00000327304 SLC2A13Q96QE2 648 aa19.55■□□□□ 0.72
EXOSC3-201ENST00000327304 NMUR1Q9HB89 426 aa19.55■□□□□ 0.72
EXOSC3-201ENST00000327304 COMMD8Q9NX08 183 aa19.55■□□□□ 0.72
EXOSC3-201ENST00000327304 MTCL1Q9Y4B5 1905 aaKnown RBP19.55■□□□□ 0.72
EXOSC3-201ENST00000327304 A0A1W2PQH9 124 aa19.54■□□□□ 0.72
EXOSC3-201ENST00000327304 TCRBV7S2A1N4TA0A589 114 aa19.54■□□□□ 0.72
EXOSC3-201ENST00000327304 SPDYE4A6NLX3 237 aa19.54■□□□□ 0.72
EXOSC3-201ENST00000327304 CSH1P0DML2 217 aa19.54■□□□□ 0.72
EXOSC3-201ENST00000327304 CSH2P0DML3 217 aa19.54■□□□□ 0.72
EXOSC3-201ENST00000327304 COPS2P61201 443 aa19.54■□□□□ 0.72
EXOSC3-201ENST00000327304 YWHAGP61981 247 aaKnown RBP eCLIP19.54■□□□□ 0.72
EXOSC3-201ENST00000327304 PLD1Q13393 1074 aa19.54■□□□□ 0.72
EXOSC3-201ENST00000327304 DUSP6Q16828 381 aa19.54■□□□□ 0.72
EXOSC3-201ENST00000327304 BSPRYQ5W0U4 402 aa19.54■□□□□ 0.72
EXOSC3-201ENST00000327304 ARCQ7LC44 396 aa19.54■□□□□ 0.72
EXOSC3-201ENST00000327304 IFT81Q8WYA0 676 aa19.54■□□□□ 0.72
EXOSC3-201ENST00000327304 EDEM1Q92611 657 aa19.54■□□□□ 0.72
EXOSC3-201ENST00000327304 CFAP57Q96MR6 1250 aa19.54■□□□□ 0.72
EXOSC3-201ENST00000327304 TTYH1Q9H313 450 aaPredicted RBP19.54■□□□□ 0.72
EXOSC3-201ENST00000327304 POPDC2Q9HBU9 364 aa19.54■□□□□ 0.72
EXOSC3-201ENST00000327304 FAM114A2Q9NRY5 505 aa19.54■□□□□ 0.72
EXOSC3-201ENST00000327304 HOMER3Q9NSC5 361 aa19.54■□□□□ 0.72
EXOSC3-201ENST00000327304 RASAL2Q9UJF2 1139 aa19.54■□□□□ 0.72
EXOSC3-201ENST00000327304 NAALADL1Q9UQQ1 740 aa19.54■□□□□ 0.72
EXOSC3-201ENST00000327304 HCFC2Q9Y5Z7 792 aa19.54■□□□□ 0.72
EXOSC3-201ENST00000327304 ESYT3A0FGR9 886 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 C1RP00736 705 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 LRG1P02750 347 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 ZNF143P52747 638 aaPredicted RBP19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 GPS2Q13227 327 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 C15orf59Q2T9L4 293 aaPredicted RBP19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 CCDC14Q49A88 953 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 SYPL2Q5VXT5 272 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 CCDC137Q6PK04 289 aaKnown RBP19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 DNAJB7Q7Z6W7 309 aaPredicted RBP19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 CCDC50Q8IVM0 306 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 PSMG2Q969U7 264 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 DDX23Q9BUQ8 820 aaKnown RBP19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 ADAM33Q9BZ11 813 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 PLEKHA4Q9H4M7 779 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 OSER1Q9NX31 292 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 NFU1Q9UMS0 254 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 SOX1O00570 391 aaPredicted RBP19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 DPYSL4O14531 572 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 RFPL2O75678 378 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 TFE3P19532 575 aaPredicted RBP19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 PTPN7P35236 360 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 COILP38432 576 aaPredicted RBP19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 MATKP42679 507 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 PTGIRP43119 386 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 DRG2P55039 364 aaKnown RBP19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 PITX1P78337 314 aaPredicted RBP19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 KLF1Q13351 362 aaPredicted RBP19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 HADHQ16836 314 aaKnown RBP19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 DCAF6Q58WW2 860 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 PPM1LQ5SGD2 360 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 SH3PXD2AQ5TCZ1 1133 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 SND1Q7KZF4 910 aaKnown RBP eCLIP19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 MON1AQ86VX9 555 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 SLCO2A1Q92959 643 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 ERP44Q9BS26 406 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 CNPY3Q9BT09 278 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 OSBPL8Q9BZF1 889 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 PRDM12Q9H4Q4 367 aa19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 ZNF334Q9HCZ1 680 aaPredicted RBP19.53■□□□□ 0.72
EXOSC3-201ENST00000327304 CCL16O15467 120 aa19.52■□□□□ 0.72
EXOSC3-201ENST00000327304 LRCH4O75427 683 aa19.52■□□□□ 0.72
EXOSC3-201ENST00000327304 KRT7P08729 469 aa19.52■□□□□ 0.72
EXOSC3-201ENST00000327304 SDC4P31431 198 aa19.52■□□□□ 0.72
EXOSC3-201ENST00000327304 ATP11AP98196 1134 aa19.52■□□□□ 0.72
EXOSC3-201ENST00000327304 TAF12Q16514 161 aa19.52■□□□□ 0.72
EXOSC3-201ENST00000327304 RAB6CQ53S08 254 aa19.52■□□□□ 0.72
EXOSC3-201ENST00000327304 TTC27Q6P3X3 843 aa19.52■□□□□ 0.72
EXOSC3-201ENST00000327304 JAMLQ86YT9 394 aa19.52■□□□□ 0.72
EXOSC3-201ENST00000327304 VN1R2Q8NFZ6 395 aa19.52■□□□□ 0.72
EXOSC3-201ENST00000327304 TRMT2BQ96GJ1 504 aaKnown RBP19.52■□□□□ 0.72
EXOSC3-201ENST00000327304 MYRFLQ96LU7 910 aa19.52■□□□□ 0.72
EXOSC3-201ENST00000327304 RAB6CQ9H0N0 254 aa19.52■□□□□ 0.72
EXOSC3-201ENST00000327304 RNF8O76064 485 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 RALAP11233 206 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 NCAM1P13591 858 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 NOS2P35228 1153 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 PTPN9P43378 593 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 SLC25A11Q02978 314 aaKnown RBP19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 CDO1Q16878 200 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 PRPF38BQ5VTL8 546 aaKnown RBP19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 OTUD1Q5VV17 481 aaPredicted RBP19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 BTBD8Q5XKL5 378 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 ITIH5Q86UX2 942 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 ARFGAP1Q8N6T3 406 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 SLITRK1Q96PX8 696 aa19.51■□□□□ 0.71
EXOSC3-201ENST00000327304 TBCBQ99426 244 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms