RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 NLRC5Q86WI3 1866 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 ZCCHC9Q8N567 271 aaKnown RBP18.53■□□□□ 0.56
RAB39A-201ENST00000320578 SLC7A14Q8TBB6 771 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 C2orf15Q8WU43 125 aaKnown RBP18.53■□□□□ 0.56
RAB39A-201ENST00000320578 EPB41L4BQ9H329 900 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 AAASQ9NRG9 546 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 ABCC13Q9NSE7 274 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 PIGVQ9NUD9 493 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 COMMD8Q9NX08 183 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 IL37Q9NZH6 218 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 CWC15Q9P013 229 aaKnown RBP18.53■□□□□ 0.56
RAB39A-201ENST00000320578 SHOC2Q9UQ13 582 aa18.53■□□□□ 0.56
RAB39A-201ENST00000320578 ABHD14A-ACY1A0A1B0GW23 586 aa18.52■□□□□ 0.56
RAB39A-201ENST00000320578 CXCR3P49682 368 aa18.52■□□□□ 0.56
RAB39A-201ENST00000320578 SLC5A3P53794 718 aa18.52■□□□□ 0.56
RAB39A-201ENST00000320578 PITX1P78337 314 aaPredicted RBP18.52■□□□□ 0.56
RAB39A-201ENST00000320578 EIF4EBP2Q13542 120 aaPredicted RBP18.52■□□□□ 0.56
RAB39A-201ENST00000320578 KCTD19Q17RG1 926 aaPredicted RBP18.52■□□□□ 0.56
RAB39A-201ENST00000320578 ARL13BQ3SXY8 428 aa18.52■□□□□ 0.56
RAB39A-201ENST00000320578 C4orf22Q6V702 233 aa18.52■□□□□ 0.56
RAB39A-201ENST00000320578 ANKS3Q6ZW76 656 aa18.52■□□□□ 0.56
RAB39A-201ENST00000320578 HOOK3Q86VS8 718 aa18.52■□□□□ 0.56
RAB39A-201ENST00000320578 TMEM109Q9BVC6 243 aa18.52■□□□□ 0.56
RAB39A-201ENST00000320578 C11orf49Q9H6J7 331 aa18.52■□□□□ 0.56
RAB39A-201ENST00000320578 TET1Q8NFU7 2136 aa18.52■□□□□ 0.56
RAB39A-201ENST00000320578 EFCAB14O75071 495 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 DGKIO75912 1065 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 IGLV3-25P01717 112 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 RABGGTBP53611 331 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 GPS1Q13098 491 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 GPR17Q13304 367 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 RNASEH2BQ5TBB1 312 aaKnown RBP18.51■□□□□ 0.55
RAB39A-201ENST00000320578 DEFB128Q7Z7B8 93 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 GLIS1Q8NBF1 620 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 SPPL2BQ8TCT7 592 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 DIS3LQ8TF46 1054 aaKnown RBP18.51■□□□□ 0.55
RAB39A-201ENST00000320578 VWCEQ96DN2 955 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 FBXO44Q9H4M3 255 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 SCML2Q9UQR0 700 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 ATP11BQ9Y2G3 1177 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 PATJQ8NI35 1801 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 OR4Q2P0C623 313 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 CBLBQ13191 982 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 NME3Q13232 169 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 DENND2CQ68D51 928 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 DARS2Q6PI48 645 aaKnown RBP18.51■□□□□ 0.55
RAB39A-201ENST00000320578 NPNTQ6UXI9 565 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 CDKL3Q8IVW4 592 aaPredicted RBP18.51■□□□□ 0.55
RAB39A-201ENST00000320578 UNC45BQ8IWX7 931 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 NUP93Q8N1F7 819 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 ARHGAP18Q8N392 663 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 RNF139Q8WU17 664 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 RIN2Q8WYP3 895 aaPredicted RBP18.51■□□□□ 0.55
RAB39A-201ENST00000320578 CEP295NLQ96MC4 621 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 TTPALQ9BTX7 342 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 USP29Q9HBJ7 922 aa18.51■□□□□ 0.55
RAB39A-201ENST00000320578 FARP1Q9Y4F1 1045 aaPredicted RBP18.51■□□□□ 0.55
RAB39A-201ENST00000320578 FAM92AA1XBS5 289 aa18.5■□□□□ 0.55
RAB39A-201ENST00000320578 GOLGA6L10A6NI86 522 aa18.5■□□□□ 0.55
RAB39A-201ENST00000320578 HACD1B0YJ81 288 aa18.5■□□□□ 0.55
RAB39A-201ENST00000320578 ZSCAN5DPP0CG00 497 aa18.5■□□□□ 0.55
RAB39A-201ENST00000320578 RPL22P35268 128 aaKnown RBP18.5■□□□□ 0.55
RAB39A-201ENST00000320578 VPS41P49754 854 aa18.5■□□□□ 0.55
RAB39A-201ENST00000320578 YWHAGP61981 247 aaKnown RBP eCLIP18.5■□□□□ 0.55
RAB39A-201ENST00000320578 ZNF844Q08AG5 666 aa18.5■□□□□ 0.55
RAB39A-201ENST00000320578 SEMA3BQ13214 749 aa18.5■□□□□ 0.55
RAB39A-201ENST00000320578 C1orf228Q6PIY5 440 aa18.5■□□□□ 0.55
RAB39A-201ENST00000320578 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.5■□□□□ 0.55
RAB39A-201ENST00000320578 MON1AQ86VX9 555 aa18.5■□□□□ 0.55
RAB39A-201ENST00000320578 SEMA4AQ9H3S1 761 aa18.5■□□□□ 0.55
RAB39A-201ENST00000320578 TMBIM4Q9HC24 238 aa18.5■□□□□ 0.55
RAB39A-201ENST00000320578 DDIT4Q9NX09 232 aa18.5■□□□□ 0.55
RAB39A-201ENST00000320578 ABI2Q9NYB9 513 aaPredicted RBP18.5■□□□□ 0.55
RAB39A-201ENST00000320578 RAD54BQ9Y620 910 aa18.5■□□□□ 0.55
RAB39A-201ENST00000320578 H7C0C1 242 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 POLR3GO15318 223 aaPredicted RBP18.49■□□□□ 0.55
RAB39A-201ENST00000320578 RIPK2O43353 540 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 IFNB1P01574 187 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 ETS1P14921 441 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 ATP5OP48047 213 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 GDF10P55107 478 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 CEP85LQ5SZL2 805 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 CEP57Q86XR8 500 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 PPIL6Q8IXY8 311 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 RNF168Q8IYW5 571 aaPredicted RBP18.49■□□□□ 0.55
RAB39A-201ENST00000320578 DNAJC5GQ8N7S2 189 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 SCAMP5Q8TAC9 235 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 DQX1Q8TE96 717 aaKnown RBP18.49■□□□□ 0.55
RAB39A-201ENST00000320578 TOP1MTQ969P6 601 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 SPATA17Q96L03 361 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 CWH43Q9H720 699 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 FAM204AQ9H8W3 233 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.49■□□□□ 0.55
RAB39A-201ENST00000320578 VPS18Q9P253 973 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 SCN5AQ14524 2016 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 HMGB1P1B2RPK0 211 aaPredicted RBP18.49■□□□□ 0.55
RAB39A-201ENST00000320578 KIAA0355O15063 1070 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 TIMP1P01033 207 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 MYZAPP0CAP1 466 aa18.49■□□□□ 0.55
RAB39A-201ENST00000320578 HSPA8P11142 646 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms