RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 RIBC1Q8N443 379 aaPredicted RBP7.86□□□□□ -1.15
IFT88-201ENST00000319980 OTUD6BQ8N6M0 293 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 FBF1Q8TES7 1133 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 HASPINQ8TF76 798 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 KCTD15Q96SI1 283 aaPredicted RBP7.86□□□□□ -1.15
IFT88-201ENST00000319980 UPF3AQ9H1J1 476 aaKnown RBP7.86□□□□□ -1.15
IFT88-201ENST00000319980 ETNK2Q9NVF9 386 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 RABGEF1Q9UJ41 708 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 INPP5FQ9Y2H2 1132 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 GIT1Q9Y2X7 761 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 NR2E3Q9Y5X4 410 aa7.86□□□□□ -1.15
IFT88-201ENST00000319980 BCLAF3A2AJT9 711 aaKnown RBP7.85□□□□□ -1.15
IFT88-201ENST00000319980 C5orf60A6NFR6 353 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 E7ESA3 106 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 SMAPO00193 183 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 NRP1O14786 923 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 CAPN9O14815 690 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 SPAG7O75391 227 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 AP1G2O75843 785 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 NOS2P35228 1153 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 ARL4AP40617 200 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 ELK3P41970 407 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 GEMIN4P57678 1058 aaKnown RBP7.85□□□□□ -1.15
IFT88-201ENST00000319980 MGAT3Q09327 533 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 UPP1Q16831 310 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 TIGD5Q53EQ6 642 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 KCNT2Q6UVM3 1135 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 CTU1Q7Z7A3 348 aaKnown RBP7.85□□□□□ -1.15
IFT88-201ENST00000319980 TRABD2AQ86V40 505 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 IGDCC3Q8IVU1 814 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 TMEM86AQ8N2M4 240 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 ADAM32Q8TC27 787 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 ADAM2Q99965 735 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 ULBP1Q9BZM6 244 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 TRMT13Q9NUP7 481 aaKnown RBP7.85□□□□□ -1.15
IFT88-201ENST00000319980 TMEM30AQ9NV96 361 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 NKIRAS1Q9NYS0 192 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 STAP1Q9ULZ2 295 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 MFHAS1Q9Y4C4 1052 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.85□□□□□ -1.15
IFT88-201ENST00000319980 CFAP69A5D8W1 941 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 YJEFN3A6XGL0 299 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 TCP11X1B4DZS4 312 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 E7ENQ6 273 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 CREB3O43889 395 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 ZFXP17010 805 aaPredicted RBP7.85□□□□□ -1.15
IFT88-201ENST00000319980 STX2P32856 288 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 CACNA2D1P54289 1103 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 KCNJ11Q14654 390 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 ARHGEF18Q6ZSZ5 1173 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 TDRPQ86YL5 185 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 C4orf33Q8N1A6 199 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 NETO2Q8NC67 525 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 KCTD13Q8WZ19 329 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 SMOQ99835 787 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 PAIP2Q9BPZ3 127 aaKnown RBP7.85□□□□□ -1.15
IFT88-201ENST00000319980 ELAC2Q9BQ52 826 aaKnown RBP7.85□□□□□ -1.15
IFT88-201ENST00000319980 RHOBTB2Q9BYZ6 727 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 KLC2Q9H0B6 622 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 CCDC134Q9H6E4 229 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 ETNK1Q9HBU6 452 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 POPDC2Q9HBU9 364 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 RNF186Q9NXI6 227 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 DTLQ9NZJ0 730 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 ZMYND8Q9ULU4 1186 aaPredicted RBP7.85□□□□□ -1.15
IFT88-201ENST00000319980 ACTL7BQ9Y614 415 aa7.85□□□□□ -1.15
IFT88-201ENST00000319980 A0A0U1RQF3 1178 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 A0A1W2PPM1 405 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 FAM47DPA6NHR8 397 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 CHADO15335 359 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 DAB1O75553 588 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 FAM163BP0C2L3 166 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 USP17L7P0C7H9 530 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 ATP2A2P16615 1042 aaKnown RBP7.84□□□□□ -1.15
IFT88-201ENST00000319980 RPL9P32969 192 aaKnown RBP7.84□□□□□ -1.15
IFT88-201ENST00000319980 BRCC3P46736 316 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 NR2C2P49116 596 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 LIG3P49916 1009 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 DEUP1Q05D60 604 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 SLC45A4Q5BKX6 768 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 NUGGCQ68CJ6 796 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 NCBP2-AS2Q69YL0 99 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 C6orf89Q6UWU4 347 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 GPRIN1Q7Z2K8 1008 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 RPAINQ86UA6 219 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 FAM35AQ86V20 835 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 RTP4Q96DX8 246 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 SMC6Q96SB8 1091 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 NPY6RQ99463 290 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 PHACTR1Q9C0D0 580 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 TRABDQ9H4I3 376 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 PSMC3IPQ9P2W1 217 aaPredicted RBP7.84□□□□□ -1.15
IFT88-201ENST00000319980 FZD10Q9ULW2 581 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 ZNF487B1APH4 448 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 KBTBD13C9JR72 458 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 ZNF623O75123 536 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 METTL18O95568 372 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 NCAM1P13591 858 aa7.84□□□□□ -1.15
IFT88-201ENST00000319980 YWHAGP61981 247 aaKnown RBP eCLIP7.84□□□□□ -1.15
IFT88-201ENST00000319980 NR1H3Q13133 447 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms