RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 VDRP11473 427 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 L1CAMP32004 1257 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 HMGCS2P54868 508 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 BOLA3Q53S33 107 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 PCDH19Q8TAB3 1148 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 TRIM4Q9C037 500 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 CYP3A43Q9HB55 503 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 PCDH18Q9HCL0 1135 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 S100A14Q9HCY8 104 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 IGKV6-21A0A0C4DH24 114 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 ACKR2O00590 384 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 PTPRAP18433 802 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 MROH9Q5TGP6 573 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 ATF7IP2Q5U623 682 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 MBLAC2Q68D91 279 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 CATSPERGQ6ZRH7 1159 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 ARHGAP18Q8N392 663 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 CXorf38Q8TB03 319 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 FAM167AQ96KS9 214 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 ZNF778Q96MU6 729 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 TTC1Q99614 292 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 FZD8Q9H461 694 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 VRTNQ9H8Y1 702 aa19.76■□□□□ 0.75
RTN4-201ENST00000317610 CPSF2Q9P2I0 782 aaKnown RBP19.76■□□□□ 0.75
RTN4-201ENST00000317610 CCNT2O60583 730 aaKnown RBP19.75■□□□□ 0.75
RTN4-201ENST00000317610 C6orf222P0C671 652 aaPredicted RBP19.75■□□□□ 0.75
RTN4-201ENST00000317610 FAM183BPQ6ZVS7 135 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 WDR75Q8IWA0 830 aaKnown RBP19.75■□□□□ 0.75
RTN4-201ENST00000317610 FAM172AQ8WUF8 416 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 TUBGCP5Q96RT8 1024 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 MOCS1Q9NZB8 636 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 ZNF112Q9UJU3 913 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 TBC1D30Q9Y2I9 924 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 AFG3L2Q9Y4W6 797 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 HEY1Q9Y5J3 304 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 ZNF487B1APH4 448 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 KLHL2O95198 593 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 EGFRP00533 1210 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 CXCL8P10145 99 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 PIM1P11309 404 aaPredicted RBP19.75■□□□□ 0.75
RTN4-201ENST00000317610 ZNF280AP59817 542 aaPredicted RBP19.75■□□□□ 0.75
RTN4-201ENST00000317610 OSTNP61366 133 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 HIC1Q14526 733 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 CCDC14Q49A88 953 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 FASTKD1Q53R41 847 aaKnown RBP19.75■□□□□ 0.75
RTN4-201ENST00000317610 EFHC1Q5JVL4 640 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 TEDDM1Q5T9Z0 273 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 EEF1DP3Q658K8 133 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 ZCCHC23Q6ZST2 131 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 CDKL3Q8IVW4 592 aaPredicted RBP19.75■□□□□ 0.75
RTN4-201ENST00000317610 MPP5Q8N3R9 675 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 PIWIL2Q8TC59 973 aaKnown RBP19.75■□□□□ 0.75
RTN4-201ENST00000317610 ACMSDQ8TDX5 336 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 PIWIL1Q96J94 861 aaKnown RBP19.75■□□□□ 0.75
RTN4-201ENST00000317610 MIS12Q9H081 205 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 RPF1Q9H9Y2 349 aaKnown RBP19.75■□□□□ 0.75
RTN4-201ENST00000317610 IL1RAPL1Q9NZN1 696 aa19.75■□□□□ 0.75
RTN4-201ENST00000317610 KLHL33A6NCF5 533 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 GCATO75600 419 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 USP1O94782 785 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 BAG2O95816 211 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 NFICP08651 508 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 PDE1BQ01064 536 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 BTKQ06187 659 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 GSTCDQ8NEC7 633 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 UBA3Q8TBC4 463 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 TBCBQ99426 244 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 TRIM56Q9BRZ2 755 aaKnown RBP19.74■□□□□ 0.75
RTN4-201ENST00000317610 ZNF670Q9BS34 389 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 GBA2Q9HCG7 927 aaPredicted RBP19.74■□□□□ 0.75
RTN4-201ENST00000317610 ETAA1Q9NY74 926 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 EMCNQ9ULC0 261 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 C19orf81C9J6K1 198 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 METTL18O95568 372 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 FGF3P11487 239 aaPredicted RBP19.74■□□□□ 0.75
RTN4-201ENST00000317610 CYP3A5P20815 502 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 ATICP31939 592 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 TCF7P36402 384 aaPredicted RBP19.74■□□□□ 0.75
RTN4-201ENST00000317610 POLE2P56282 527 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 STEAP4Q687X5 459 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 OR6B2Q6IFH4 312 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 ACAD11Q709F0 780 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 RAPH1Q70E73 1250 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 DHDDSQ86SQ9 333 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 NCAPG2Q86XI2 1143 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 PDSS2Q86YH6 399 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 TMEM192Q8IY95 271 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 SEPT1Q8WYJ6 367 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 NCSTNQ92542 709 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 CDT1Q9H211 546 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 GPATCH2LQ9NWQ4 482 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 ITGA11Q9UKX5 1188 aa19.74■□□□□ 0.75
RTN4-201ENST00000317610 SPDYE16A6NNV3 312 aaPredicted RBP19.73■□□□□ 0.75
RTN4-201ENST00000317610 MEI4A8MW99 385 aa19.73■□□□□ 0.75
RTN4-201ENST00000317610 ZBTB42B2RXF5 422 aa19.73■□□□□ 0.75
RTN4-201ENST00000317610 RTN3O95197 1032 aaPredicted RBP19.73■□□□□ 0.75
RTN4-201ENST00000317610 CDK7P50613 346 aa19.73■□□□□ 0.75
RTN4-201ENST00000317610 CDO1Q16878 200 aa19.73■□□□□ 0.75
RTN4-201ENST00000317610 NBPF12Q5TAG4 269 aaPredicted RBP19.73■□□□□ 0.75
RTN4-201ENST00000317610 PGM2L1Q6PCE3 622 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms