RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 CHRM1P11229 460 aaPredicted RBP18.6■□□□□ 0.57
TPM1-203ENST00000317516 CORO1AP31146 461 aaKnown RBP18.6■□□□□ 0.57
TPM1-203ENST00000317516 STX17P56962 302 aa18.6■□□□□ 0.57
TPM1-203ENST00000317516 UBE2HP62256 183 aa18.6■□□□□ 0.57
TPM1-203ENST00000317516 KCNH2Q12809 1159 aa18.6■□□□□ 0.57
TPM1-203ENST00000317516 E2F5Q15329 346 aa18.6■□□□□ 0.57
TPM1-203ENST00000317516 SF3A2Q15428 464 aaKnown RBP18.6■□□□□ 0.57
TPM1-203ENST00000317516 CCDC6Q16204 474 aa18.6■□□□□ 0.57
TPM1-203ENST00000317516 IL31Q6EBC2 164 aa18.6■□□□□ 0.57
TPM1-203ENST00000317516 TRIM59Q8IWR1 403 aa18.6■□□□□ 0.57
TPM1-203ENST00000317516 CHPFQ8IZ52 775 aa18.6■□□□□ 0.57
TPM1-203ENST00000317516 UBR7Q8N806 425 aa18.6■□□□□ 0.57
TPM1-203ENST00000317516 EHBP1Q8NDI1 1231 aa18.6■□□□□ 0.57
TPM1-203ENST00000317516 OLIG1Q8TAK6 271 aa18.6■□□□□ 0.57
TPM1-203ENST00000317516 HMGB4Q8WW32 186 aa18.6■□□□□ 0.57
TPM1-203ENST00000317516 CNGB3Q9NQW8 809 aa18.6■□□□□ 0.57
TPM1-203ENST00000317516 SDK1Q7Z5N4 2213 aa18.59■□□□□ 0.57
TPM1-203ENST00000317516 MED19A0JLT2 244 aaPredicted RBP18.59■□□□□ 0.57
TPM1-203ENST00000317516 BCLAF3A2AJT9 711 aaKnown RBP18.59■□□□□ 0.57
TPM1-203ENST00000317516 TULP2O00295 520 aa18.59■□□□□ 0.57
TPM1-203ENST00000317516 TRIM24O15164 1050 aa18.59■□□□□ 0.57
TPM1-203ENST00000317516 GDF9O60383 454 aa18.59■□□□□ 0.57
TPM1-203ENST00000317516 AFPP02771 609 aaKnown RBP18.59■□□□□ 0.57
TPM1-203ENST00000317516 HOXB2P14652 356 aa18.59■□□□□ 0.57
TPM1-203ENST00000317516 HNRNPLP14866 589 aaKnown RBP eCLIP18.59■□□□□ 0.574e-7■■□□□ 13.3
TPM1-203ENST00000317516 HARS2P49590 506 aaKnown RBP18.59■□□□□ 0.57
TPM1-203ENST00000317516 LIMK1P53667 647 aa18.59■□□□□ 0.57
TPM1-203ENST00000317516 MARSP56192 900 aaKnown RBP18.59■□□□□ 0.57
TPM1-203ENST00000317516 GCNT1Q02742 428 aa18.59■□□□□ 0.57
TPM1-203ENST00000317516 ADIGQ0VDE8 80 aa18.59■□□□□ 0.57
TPM1-203ENST00000317516 BSPRYQ5W0U4 402 aa18.59■□□□□ 0.57
TPM1-203ENST00000317516 PMS2CLQ68D20 193 aa18.59■□□□□ 0.57
TPM1-203ENST00000317516 LPCAT2Q7L5N7 544 aa18.59■□□□□ 0.57
TPM1-203ENST00000317516 DENND1CQ8IV53 801 aa18.59■□□□□ 0.57
TPM1-203ENST00000317516 SCML4Q8N228 414 aa18.59■□□□□ 0.57
TPM1-203ENST00000317516 LMO3Q8TAP4 145 aa18.59■□□□□ 0.57
TPM1-203ENST00000317516 BHMTQ93088 406 aa18.59■□□□□ 0.57
TPM1-203ENST00000317516 PLD4Q96BZ4 506 aa18.59■□□□□ 0.57
TPM1-203ENST00000317516 ZDHHC4Q9NPG8 344 aa18.59■□□□□ 0.57
TPM1-203ENST00000317516 ABCC13Q9NSE7 274 aa18.59■□□□□ 0.57
TPM1-203ENST00000317516 PLK2Q9NYY3 685 aa18.59■□□□□ 0.57
TPM1-203ENST00000317516 KIAA1468Q9P260 1216 aa18.59■□□□□ 0.57
TPM1-203ENST00000317516 FBXO10Q9UK96 956 aa18.59■□□□□ 0.57
TPM1-203ENST00000317516 AGO1Q9UL18 857 aaKnown RBP18.59■□□□□ 0.57
TPM1-203ENST00000317516 DMXL1Q9Y485 3027 aa18.58■□□□□ 0.57
TPM1-203ENST00000317516 GFRA2O00451 464 aa18.58■□□□□ 0.56
TPM1-203ENST00000317516 PENKP01210 267 aaPredicted RBP18.58■□□□□ 0.56
TPM1-203ENST00000317516 CISD3P0C7P0 127 aa18.58■□□□□ 0.56
TPM1-203ENST00000317516 P2RY2P41231 377 aa18.58■□□□□ 0.56
TPM1-203ENST00000317516 PKDCCQ504Y2 493 aa18.58■□□□□ 0.56
TPM1-203ENST00000317516 SPDYCQ5MJ68 293 aa18.58■□□□□ 0.56
TPM1-203ENST00000317516 RRAGAQ7L523 313 aa18.58■□□□□ 0.56
TPM1-203ENST00000317516 CPXM2Q8N436 756 aa18.58■□□□□ 0.56
TPM1-203ENST00000317516 GOLGA1Q92805 767 aa18.58■□□□□ 0.56
TPM1-203ENST00000317516 CHMP5Q9NZZ3 219 aa18.58■□□□□ 0.56
TPM1-203ENST00000317516 SLC27A6Q9Y2P4 619 aa18.58■□□□□ 0.56
TPM1-203ENST00000317516 HBS1LQ9Y450 684 aaKnown RBP18.58■□□□□ 0.56
TPM1-203ENST00000317516 NPC1O15118 1278 aa18.57■□□□□ 0.56
TPM1-203ENST00000317516 LCP1P13796 627 aa18.57■□□□□ 0.56
TPM1-203ENST00000317516 WASP42768 502 aa18.57■□□□□ 0.56
TPM1-203ENST00000317516 DHPSP49366 369 aaPredicted RBP18.57■□□□□ 0.56
TPM1-203ENST00000317516 TRIP4Q15650 581 aaPredicted RBP18.57■□□□□ 0.56
TPM1-203ENST00000317516 EGFLAMQ63HQ2 1017 aa18.57■□□□□ 0.56
TPM1-203ENST00000317516 TOGARAM2Q6ZUX3 1019 aa18.57■□□□□ 0.56
TPM1-203ENST00000317516 CYP2U1Q7Z449 544 aa18.57■□□□□ 0.56
TPM1-203ENST00000317516 FMNL3Q8IVF7 1028 aa18.57■□□□□ 0.56
TPM1-203ENST00000317516 RBBP8NLQ8NC74 664 aaPredicted RBP18.57■□□□□ 0.56
TPM1-203ENST00000317516 DDI1Q8WTU0 396 aa18.57■□□□□ 0.56
TPM1-203ENST00000317516 SLC35F5Q8WV83 523 aa18.57■□□□□ 0.56
TPM1-203ENST00000317516 UCMAQ8WVF2 138 aa18.57■□□□□ 0.56
TPM1-203ENST00000317516 RLN3Q8WXF3 142 aa18.57■□□□□ 0.56
TPM1-203ENST00000317516 IRGQQ8WZA9 623 aa18.57■□□□□ 0.56
TPM1-203ENST00000317516 TFAP2BQ92481 460 aa18.57■□□□□ 0.56
TPM1-203ENST00000317516 NDRG1Q92597 394 aaKnown RBP18.57■□□□□ 0.56
TPM1-203ENST00000317516 HSFY1Q96LI6 401 aa18.57■□□□□ 0.56
TPM1-203ENST00000317516 FAM81BQ96LP2 452 aa18.57■□□□□ 0.56
TPM1-203ENST00000317516 SLC2A11Q9BYW1 496 aa18.57■□□□□ 0.56
TPM1-203ENST00000317516 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.57■□□□□ 0.56
TPM1-203ENST00000317516 MYH10P35580 1976 aa18.57■□□□□ 0.56
TPM1-203ENST00000317516 DCHS1Q96JQ0 3298 aa18.57■□□□□ 0.56
TPM1-203ENST00000317516 YJEFN3A6XGL0 299 aa18.56■□□□□ 0.56
TPM1-203ENST00000317516 PRRT4C9JH25 899 aa18.56■□□□□ 0.56
TPM1-203ENST00000317516 E7ENQ6 273 aa18.56■□□□□ 0.56
TPM1-203ENST00000317516 M0QYV0 167 aa18.56■□□□□ 0.56
TPM1-203ENST00000317516 RNF225M0QZC1 329 aaPredicted RBP18.56■□□□□ 0.56
TPM1-203ENST00000317516 KHNYNO15037 678 aaKnown RBP18.56■□□□□ 0.56
TPM1-203ENST00000317516 ZNF217O75362 1048 aa18.56■□□□□ 0.56
TPM1-203ENST00000317516 BCKDHBP21953 392 aa18.56■□□□□ 0.56
TPM1-203ENST00000317516 DPP6P42658 865 aa18.56■□□□□ 0.56
TPM1-203ENST00000317516 ZNF445P59923 1031 aa18.56■□□□□ 0.56
TPM1-203ENST00000317516 CAMK4Q16566 473 aa18.56■□□□□ 0.56
TPM1-203ENST00000317516 FYB2Q5VWT5 728 aa18.56■□□□□ 0.56
TPM1-203ENST00000317516 SLC36A4Q6YBV0 504 aa18.56■□□□□ 0.56
TPM1-203ENST00000317516 BHLHA9Q7RTU4 235 aa18.56■□□□□ 0.56
TPM1-203ENST00000317516 CREBRFQ8IUR6 639 aa18.56■□□□□ 0.56
TPM1-203ENST00000317516 EDEM1Q92611 657 aa18.56■□□□□ 0.56
TPM1-203ENST00000317516 KAT5Q92993 513 aa18.56■□□□□ 0.56
TPM1-203ENST00000317516 GABRG3Q99928 467 aa18.56■□□□□ 0.56
TPM1-203ENST00000317516 RWDD2AQ9UIY3 292 aa18.56■□□□□ 0.56
TPM1-203ENST00000317516 TIMM44O43615 452 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms