RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 CCDC114Q96M63 670 aa16.37■□□□□ 0.21
CALR-201ENST00000316448 KCTD15Q96SI1 283 aaPredicted RBP16.37■□□□□ 0.21
CALR-201ENST00000316448 NMUR1Q9HB89 426 aa16.37■□□□□ 0.21
CALR-201ENST00000316448 WDR6Q9NNW5 1121 aaKnown RBP16.37■□□□□ 0.21
CALR-201ENST00000316448 GOLGA6AQ9NYA3 693 aa16.37■□□□□ 0.21
CALR-201ENST00000316448 MTRF1LQ9UGC7 380 aaKnown RBP16.37■□□□□ 0.21
CALR-201ENST00000316448 ASIC3Q9UHC3 531 aa16.37■□□□□ 0.21
CALR-201ENST00000316448 ALPK3Q96L96 1907 aa16.37■□□□□ 0.21
CALR-201ENST00000316448 PATJQ8NI35 1801 aa16.37■□□□□ 0.21
CALR-201ENST00000316448 MDM4O15151 490 aa16.37■□□□□ 0.21
CALR-201ENST00000316448 NCAM1P13591 858 aa16.37■□□□□ 0.21
CALR-201ENST00000316448 ZNF844Q08AG5 666 aa16.37■□□□□ 0.21
CALR-201ENST00000316448 NME3Q13232 169 aa16.37■□□□□ 0.21
CALR-201ENST00000316448 BTG3Q14201 252 aaPredicted RBP16.37■□□□□ 0.21
CALR-201ENST00000316448 SPOUT1Q5T280 376 aaKnown RBP16.37■□□□□ 0.21
CALR-201ENST00000316448 GLIS1Q8NBF1 620 aa16.37■□□□□ 0.21
CALR-201ENST00000316448 PCDH19Q8TAB3 1148 aa16.37■□□□□ 0.21
CALR-201ENST00000316448 SLC7A14Q8TBB6 771 aa16.37■□□□□ 0.21
CALR-201ENST00000316448 UBLCP1Q8WVY7 318 aaPredicted RBP16.37■□□□□ 0.21
CALR-201ENST00000316448 RNF157Q96PX1 679 aa16.37■□□□□ 0.21
CALR-201ENST00000316448 DHX35Q9H5Z1 703 aaKnown RBP16.37■□□□□ 0.21
CALR-201ENST00000316448 OSER1Q9NX31 292 aa16.37■□□□□ 0.21
CALR-201ENST00000316448 FZD10Q9ULW2 581 aa16.37■□□□□ 0.21
CALR-201ENST00000316448 ATP8A1Q9Y2Q0 1164 aa16.37■□□□□ 0.21
CALR-201ENST00000316448 CDY1Q9Y6F8 540 aa16.37■□□□□ 0.21
CALR-201ENST00000316448 COL4A4P53420 1690 aaPredicted RBP16.37■□□□□ 0.21
CALR-201ENST00000316448 CAPN9O14815 690 aa16.36■□□□□ 0.21
CALR-201ENST00000316448 CPB1P15086 417 aa16.36■□□□□ 0.21
CALR-201ENST00000316448 KLRC2P26717 231 aa16.36■□□□□ 0.21
CALR-201ENST00000316448 MAGEA11P43364 429 aa16.36■□□□□ 0.21
CALR-201ENST00000316448 LMNB2Q03252 620 aa16.36■□□□□ 0.21
CALR-201ENST00000316448 CALCOCO2Q13137 446 aa16.36■□□□□ 0.21
CALR-201ENST00000316448 KRT81Q14533 505 aa16.36■□□□□ 0.21
CALR-201ENST00000316448 OASLQ15646 514 aaKnown RBP16.36■□□□□ 0.21
CALR-201ENST00000316448 USP41Q3LFD5 358 aa16.36■□□□□ 0.21
CALR-201ENST00000316448 GLIPR1L2Q4G1C9 344 aa16.36■□□□□ 0.21
CALR-201ENST00000316448 VSTM1Q6UX27 236 aa16.36■□□□□ 0.21
CALR-201ENST00000316448 ANKS3Q6ZW76 656 aa16.36■□□□□ 0.21
CALR-201ENST00000316448 FBXO22Q8NEZ5 403 aa16.36■□□□□ 0.21
CALR-201ENST00000316448 SLC35B2Q8TB61 432 aa16.36■□□□□ 0.21
CALR-201ENST00000316448 ACTL9Q8TC94 416 aa16.36■□□□□ 0.21
CALR-201ENST00000316448 NKD2Q969F2 451 aaPredicted RBP16.36■□□□□ 0.21
CALR-201ENST00000316448 PABPC3Q9H361 631 aaKnown RBP16.36■□□□□ 0.21
CALR-201ENST00000316448 CXXC1Q9P0U4 656 aaPredicted RBP16.36■□□□□ 0.21
CALR-201ENST00000316448 AP4E1Q9UPM8 1137 aa16.36■□□□□ 0.21
CALR-201ENST00000316448 WDR27A2RRH5 827 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 H7C4K7 107 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 C2CD2LO14523 706 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 NUDT17P0C025 328 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 CAPN2P17655 700 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 ITIH2P19823 946 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 RDXP35241 583 aaKnown RBP16.35■□□□□ 0.21
CALR-201ENST00000316448 PMS2P54278 862 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 OTUD4Q01804 1114 aaKnown RBP16.35■□□□□ 0.21
CALR-201ENST00000316448 DEUP1Q05D60 604 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 DUSP4Q13115 394 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 BYSLQ13895 437 aaKnown RBP16.35■□□□□ 0.21
CALR-201ENST00000316448 PDK2Q15119 407 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 TRIP13Q15645 432 aaPredicted RBP16.35■□□□□ 0.21
CALR-201ENST00000316448 DPYSL2Q16555 572 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 ANKRD20A8PQ5CZ79 823 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 PPP6R3Q5H9R7 873 aaPredicted RBP16.35■□□□□ 0.21
CALR-201ENST00000316448 FAM182AQ5T1J6 154 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 B4GALNT4Q76KP1 1039 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 CMTR2Q8IYT2 770 aaKnown RBP16.35■□□□□ 0.21
CALR-201ENST00000316448 CCDC89Q8N998 374 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 COLGALT1Q8NBJ5 622 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 ZNF558Q96NG5 402 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 NCAPGQ9BPX3 1015 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 CLSTN3Q9BQT9 956 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.35■□□□□ 0.21
CALR-201ENST00000316448 MTRRQ9UBK8 725 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 STAP1Q9ULZ2 295 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 LINC00271P0C7V0 271 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 HAPLN1P10915 354 aaPredicted RBP16.35■□□□□ 0.21
CALR-201ENST00000316448 ETS1P14921 441 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 ATF2P15336 505 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 VCPP55072 806 aaKnown RBP16.35■□□□□ 0.21
CALR-201ENST00000316448 YWHAGP61981 247 aaKnown RBP eCLIP16.35■□□□□ 0.21
CALR-201ENST00000316448 DMTNQ08495 405 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 TAC4Q86UU9 113 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 NUP93Q8N1F7 819 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 FAM76AQ8TAV0 307 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 FAF2Q96CS3 445 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 PKNOX2Q96KN3 472 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 FRMD8P1Q9BZ68 369 aaPredicted RBP16.35■□□□□ 0.21
CALR-201ENST00000316448 IL37Q9NZH6 218 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 NUDT5Q9UKK9 219 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 MFHAS1Q9Y4C4 1052 aa16.35■□□□□ 0.21
CALR-201ENST00000316448 A0A1W2PQH9 124 aa16.34■□□□□ 0.21
CALR-201ENST00000316448 EFCAB14O75071 495 aa16.34■□□□□ 0.21
CALR-201ENST00000316448 BAIAP3O94812 1187 aa16.34■□□□□ 0.21
CALR-201ENST00000316448 FGBP02675 491 aa16.34■□□□□ 0.21
CALR-201ENST00000316448 ZSCAN5DPP0CG00 497 aa16.34■□□□□ 0.21
CALR-201ENST00000316448 OR1D2P34982 312 aa16.34■□□□□ 0.21
CALR-201ENST00000316448 ROR1Q01973 937 aa16.34■□□□□ 0.21
CALR-201ENST00000316448 CAV1Q03135 178 aa16.34■□□□□ 0.21
CALR-201ENST00000316448 EIF4EBP2Q13542 120 aaPredicted RBP16.34■□□□□ 0.21
CALR-201ENST00000316448 SLMAPQ14BN4 828 aa16.34■□□□□ 0.21
CALR-201ENST00000316448 PSMD5Q16401 504 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms