RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 AP3B1O00203 1094 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 POMCP01189 267 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 TCF4P15884 667 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 CUL3Q13618 768 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 UGP2Q16851 508 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 PIGZQ86VD9 579 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 CATSPERBQ9H7T0 1116 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 NRDE2Q9H7Z3 1164 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 TUBGCP4Q9UGJ1 667 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 GLRA3O75311 464 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 CSPG5O95196 566 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 CREB1P16220 341 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 ATP4AP20648 1035 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 NR2C2P49116 596 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 TPD52P55327 224 aaPredicted RBP13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 WSCD1Q658N2 575 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 FNIP1Q8TF40 1166 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 TMEM109Q9BVC6 243 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 TMEM120AQ9BXJ8 343 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 LRRC40Q9H9A6 602 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 EPS15L1Q9UBC2 864 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 A0A1W2PPM1 405 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 CHADO15335 359 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 AVILO75366 819 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 ASPAP45381 313 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 SATB1Q01826 763 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 OCRLQ01968 901 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 ZNF235Q14590 738 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 SLC45A4Q5BKX6 768 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 LCLAT1Q6UWP7 414 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 CRELD2Q6UXH1 353 aaPredicted RBP13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 SLC25A41Q8N5S1 370 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 ANKRD52Q8NB46 1076 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 ZC3H15Q8WU90 426 aaKnown RBP13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 TRIM56Q9BRZ2 755 aaKnown RBP13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 ACSS3Q9H6R3 686 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 TXNRD2Q9NNW7 524 aa13.84□□□□□ -0.19
PCDHB9-201ENST00000316105 NRAPQ86VF7 1730 aa13.83□□□□□ -0.19
PCDHB9-201ENST00000316105 PSMD3O43242 534 aa13.83□□□□□ -0.19
PCDHB9-201ENST00000316105 KCNA3P22001 575 aa13.83□□□□□ -0.19
PCDHB9-201ENST00000316105 MGAT1P26572 445 aa13.83□□□□□ -0.19
PCDHB9-201ENST00000316105 TAF5Q15542 800 aa13.83□□□□□ -0.19
PCDHB9-201ENST00000316105 SLC10A6Q3KNW5 377 aa13.83□□□□□ -0.19
PCDHB9-201ENST00000316105 DUSP28Q4G0W2 176 aa13.83□□□□□ -0.19
PCDHB9-201ENST00000316105 RGS9BPQ6ZS82 235 aa13.83□□□□□ -0.19
PCDHB9-201ENST00000316105 PRCCQ92733 491 aaPredicted RBP13.83□□□□□ -0.19
PCDHB9-201ENST00000316105 ATP6V1E2Q96A05 226 aa13.83□□□□□ -0.19
PCDHB9-201ENST00000316105 PPWD1Q96BP3 646 aaKnown RBP13.83□□□□□ -0.19
PCDHB9-201ENST00000316105 CELF6Q96J87 481 aaKnown RBP13.83□□□□□ -0.19
PCDHB9-201ENST00000316105 TMEM237Q96Q45 408 aa13.83□□□□□ -0.19
PCDHB9-201ENST00000316105 ULBP1Q9BZM6 244 aa13.83□□□□□ -0.19
PCDHB9-201ENST00000316105 MINDY3Q9H8M7 445 aa13.83□□□□□ -0.19
PCDHB9-201ENST00000316105 C22orf31O95567 290 aa13.83□□□□□ -0.2
PCDHB9-201ENST00000316105 HIC1Q14526 733 aa13.83□□□□□ -0.2
PCDHB9-201ENST00000316105 EFTUD2Q15029 972 aaKnown RBP eCLIP13.83□□□□□ -0.2
PCDHB9-201ENST00000316105 FSCN1Q16658 493 aaKnown RBP13.83□□□□□ -0.2
PCDHB9-201ENST00000316105 TAF2Q6P1X5 1199 aa13.83□□□□□ -0.2
PCDHB9-201ENST00000316105 CES3Q6UWW8 571 aa13.83□□□□□ -0.2
PCDHB9-201ENST00000316105 MYLK4Q86YV6 388 aaPredicted RBP13.83□□□□□ -0.2
PCDHB9-201ENST00000316105 SLC26A7Q8TE54 656 aa13.83□□□□□ -0.2
PCDHB9-201ENST00000316105 LRGUKQ96M69 825 aa13.83□□□□□ -0.2
PCDHB9-201ENST00000316105 TJP2Q9UDY2 1190 aa13.83□□□□□ -0.2
PCDHB9-201ENST00000316105 SCOCQ9UIL1 159 aa13.83□□□□□ -0.2
PCDHB9-201ENST00000316105 RPL10AP62906 217 aaKnown RBP13.83□□□□□ -0.2
PCDHB9-201ENST00000316105 TXNRD3NBQ6F5E7 133 aa13.83□□□□□ -0.2
PCDHB9-201ENST00000316105 SENP8Q96LD8 212 aa13.83□□□□□ -0.2
PCDHB9-201ENST00000316105 SHCBP1LQ9BZQ2 653 aa13.83□□□□□ -0.2
PCDHB9-201ENST00000316105 MYLK2Q9H1R3 596 aa13.83□□□□□ -0.2
PCDHB9-201ENST00000316105 EFR3BQ9Y2G0 817 aa13.83□□□□□ -0.2
PCDHB9-201ENST00000316105 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.83□□□□□ -0.2
PCDHB9-201ENST00000316105 LOC100653049A0A140TA62 436 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 TSPAN1O60635 241 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 USP12O75317 370 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 KRT34O76011 436 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 AQP5P55064 265 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 MAPRE1Q15691 268 aaKnown RBP13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 ANO4Q32M45 955 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 NETO2Q8NC67 525 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 Q9H521 79 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 GOLGA2P5Q9HBQ8 144 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 HMGXB4Q9UGU5 601 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 BTBD19C9JJ37 291 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 CBX6O95503 412 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 ATP6V1G2O95670 118 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 PTPN1P18031 435 aaKnown RBP13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 AP2B1P63010 937 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 CRADDP78560 199 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 LRRC52Q8N7C0 313 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 B3GALNT2Q8NCR0 500 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 ELMO2Q96JJ3 720 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 HSFY1Q96LI6 401 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 PCDH18Q9HCL0 1135 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 NDE1Q9NXR1 346 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 SLX4Q8IY92 1834 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 TTLL13PA6NNM8 815 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 MMP3P08254 477 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 ELF1P32519 619 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 MGAT5Q09328 741 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 STRA8Q7Z7C7 330 aa13.82□□□□□ -0.2
PCDHB9-201ENST00000316105 SKA2Q8WVK7 121 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms