RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 CALML6Q8TD86 181 aa14.12□□□□□ -0.15
DDX54-202ENST00000314045 TSR3Q9UJK0 312 aaKnown RBP14.12□□□□□ -0.15
DDX54-202ENST00000314045 AJAP1Q9UKB5 411 aaPredicted RBP14.12□□□□□ -0.15
DDX54-202ENST00000314045 MRPL42Q9Y6G3 142 aaKnown RBP14.12□□□□□ -0.15
DDX54-202ENST00000314045 RHOCP08134 193 aa14.12□□□□□ -0.15
DDX54-202ENST00000314045 HNRNPH2P55795 449 aaKnown RBP14.12□□□□□ -0.15
DDX54-202ENST00000314045 OXCT1P55809 520 aa14.12□□□□□ -0.15
DDX54-202ENST00000314045 ZC3H12AQ5D1E8 599 aaKnown RBP14.12□□□□□ -0.15
DDX54-202ENST00000314045 TMEM199Q8N511 208 aa14.12□□□□□ -0.15
DDX54-202ENST00000314045 TFAP2BQ92481 460 aa14.12□□□□□ -0.15
DDX54-202ENST00000314045 XPO6Q96QU8 1125 aaKnown RBP14.12□□□□□ -0.15
DDX54-202ENST00000314045 CDK5RAP1Q96SZ6 601 aaKnown RBP14.12□□□□□ -0.15
DDX54-202ENST00000314045 GPR63Q9BZJ6 419 aa14.12□□□□□ -0.15
DDX54-202ENST00000314045 NOCTQ9UK39 431 aaKnown RBP14.12□□□□□ -0.15
DDX54-202ENST00000314045 PECAM1P16284 738 aaPredicted RBP14.12□□□□□ -0.15
DDX54-202ENST00000314045 RBL1P28749 1068 aa14.12□□□□□ -0.15
DDX54-202ENST00000314045 TARBP2Q15633 366 aaKnown RBP14.12□□□□□ -0.15
DDX54-202ENST00000314045 ANKS3Q6ZW76 656 aa14.12□□□□□ -0.15
DDX54-202ENST00000314045 CCNJLQ8IV13 435 aa14.12□□□□□ -0.15
DDX54-202ENST00000314045 TUBB6Q9BUF5 446 aa14.12□□□□□ -0.15
DDX54-202ENST00000314045 NT5MQ9NPB1 228 aa14.12□□□□□ -0.15
DDX54-202ENST00000314045 OR12D3Q9UGF7 316 aa14.12□□□□□ -0.15
DDX54-202ENST00000314045 XPO1O14980 1071 aaKnown RBP14.11□□□□□ -0.15
DDX54-202ENST00000314045 RAMP2O60895 175 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 ENDOD1O94919 500 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 VNN1O95497 513 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 ARFIP2P53365 341 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 TAPT1Q6NXT6 567 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 TTC30AQ86WT1 665 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 CARNMT1Q8N4J0 409 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 CNGB3Q9NQW8 809 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 VPS28Q9UK41 221 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 PCDHB8Q9UN66 801 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 ZSCAN5DPP0CG00 497 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 PCK1P35558 622 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 OCRLQ01968 901 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 MARC1Q5VT66 337 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 POLNQ7Z5Q5 900 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 LZTR1Q8N653 840 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 SLC4A11Q8NBS3 891 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 DBF4BQ8NFT6 615 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 BLOC1S5Q8TDH9 187 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 WDR70Q9NW82 654 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 FAM8A1Q9UBU6 413 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 GTF2IRD1Q9UHL9 959 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 NAV1Q8NEY1 1877 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 XIRP1Q702N8 1843 aaKnown RBP14.11□□□□□ -0.15
DDX54-202ENST00000314045 MATKP42679 507 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 CLCNKBP51801 687 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 MRPS5P82675 430 aaKnown RBP14.11□□□□□ -0.15
DDX54-202ENST00000314045 MAP3K21Q5TCX8 1036 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 SDHAF4Q5VUM1 108 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 HIBCHQ6NVY1 386 aaPredicted RBP14.11□□□□□ -0.15
DDX54-202ENST00000314045 MDM1Q8TC05 714 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 RNF157Q96PX1 679 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 LRRC40Q9H9A6 602 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 VANGL2Q9ULK5 521 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 SLC27A5Q9Y2P5 690 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 TELO2Q9Y4R8 837 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 MYO9BQ13459 2157 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 ABCA3Q99758 1704 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 ERBB2P04626 1255 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 FECHP22830 423 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 TPD52P55327 224 aaPredicted RBP14.11□□□□□ -0.15
DDX54-202ENST00000314045 PDCD7Q8N8D1 485 aaKnown RBP14.11□□□□□ -0.15
DDX54-202ENST00000314045 CCT8L2Q96SF2 557 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 EGFL8Q99944 293 aa14.11□□□□□ -0.15
DDX54-202ENST00000314045 TACO1Q9BSH4 297 aaKnown RBP14.11□□□□□ -0.15
DDX54-202ENST00000314045 RNF103O00237 685 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 CBX4O00257 560 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 STK25O00506 426 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 FSCN2O14926 492 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 STX7O15400 261 aaKnown RBP14.1□□□□□ -0.15
DDX54-202ENST00000314045 DIAPH2O60879 1101 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 CAND2O75155 1236 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 OR1E1P30953 314 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 LSP1P33241 339 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 USP41Q3LFD5 358 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 BBS12Q6ZW61 710 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 PLEKHO2Q8TD55 490 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 LRRC37BQ96QE4 947 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 GDF3Q9NR23 364 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 NSMCE4AQ9NXX6 385 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 SLC39A10Q9ULF5 831 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 E2F8A0AVK6 867 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 OPHN1O60890 802 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 BAG2O95816 211 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 CHRNB2P17787 502 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 CYP3A5P20815 502 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 POU5F1Q01860 360 aaKnown RBP14.1□□□□□ -0.15
DDX54-202ENST00000314045 MMRN1Q13201 1228 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 TTC39BQ5VTQ0 682 aaPredicted RBP14.1□□□□□ -0.15
DDX54-202ENST00000314045 TMC3Q7Z5M5 1100 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 GRAMD1AQ96CP6 724 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 ELMO2Q96JJ3 720 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 ATXN3LQ9H3M9 355 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 FAM96AQ9H5X1 160 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 MRPL17Q9NRX2 175 aaKnown RBP14.1□□□□□ -0.15
DDX54-202ENST00000314045 CACNA1SQ13698 1873 aa14.1□□□□□ -0.15
DDX54-202ENST00000314045 ARL5CA6NH57 179 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms